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Protein Overview: SPBC36.01c

General Information:
Name(s) found: SPBC36.01c [Sanger Pombe]
Description(s) found:
Found 17 descriptions.
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  • spermidine family transporter [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 580 amino acids

    Gene Ontology:
    Cellular Component: integral to membrane [IEA]
    plasma membrane [ISSLink to PubMed article]
    Biological Process: spermine transport [ICLink to PubMed article]
    transmembrane transport [IEA]
    spermidine transport [ICLink to PubMed article]
    polyamine transport [ISSLink to PubMed article]
    Molecular Function: spermine transmembrane transporter activity [ISSLink to PubMed article]
    spermidine transmembrane transporter activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSESSVNADT PKNTNDVLNG AYQSATTEPE GQYRSATDNP SLYQVPTHGS LYRNLSNSAS  60
   61 AYYPANGNMN SREPANELSD ISSLAEKGEL EPPMAKLLSD PDFQGKQFPT VEAPELFIFE 120
  121 LAPDSPSIAL NWTFWRKMKT TSIYAYASLT IAWGSSVLSP ASATLAKKYH IGMTTSLLNV 180
  181 SLFMLGYCLG PICWAPMSEI TGRKTPLYIG LFLFSVFQIA VATAQDIQTI MICRFFGGYG 240
  241 ACVPLCVVAA AFADMYPNRY RGTAITIFAA VIFVGPLVAP IVGGFLTKSY LGWRWTEYIT 300
  301 SFMGFLSIIL IYLFCEETYL KTITENKVQE YREITGNQLV HARSEEESLS ARDIIMNYLL 360
  361 IPLKMLATEP IVFLVSLYCS FVYAIIYLLL EAYPVIFQEG RHFPLGVSAL PYIGILVGVF 420
  421 IGCGINCLFE PWYFRQVIKA GNKPAPEARL PPMMIGSFLF PAGIFWLAWS GYYTYVHWIV 480
  481 PTLSGLLTGA GILLIFLQCL NYLLDAYLFR AASVFAANVI MRSAVAGGFP LFAVQMFHNM 540
  541 GVGWAGSLLG FIATALIPMP FAFFFFGKKI RAKSKMTAQF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..114] deduced N/A No confident structure predictions are available.
    2 View Details [115..580] PSI-BLAST 37.154902 Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • transporter activity
    		•  4.09176719149278 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  3.59744164024479 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  3.5865018981083 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  3.54194478414824 bayes_pls_golite062009
  • hexose phosphate transmembrane transporter activity
    		•  3.18173622457291 bayes_pls_golite062009
  • glucose-6-phosphate transmembrane transporter activity
    		•  3.18173622457291 bayes_pls_golite062009
  • sugar:hydrogen symporter activity
    		•  2.99050613058546 bayes_pls_golite062009
  • cation:sugar symporter activity
    		•  2.99050613058546 bayes_pls_golite062009
  • monosaccharide transmembrane transporter activity
    		•  2.63293544825311 bayes_pls_golite062009
  • carbohydrate transmembrane transporter activity
    		•  2.62141276633776 bayes_pls_golite062009
  • sugar transmembrane transporter activity
    		•  2.47557586092261 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  2.21266150105753 bayes_pls_golite062009
  • solute:hydrogen symporter activity
    		•  2.10485633822652 bayes_pls_golite062009
  • cation transmembrane transporter activity
    		•  1.79369588808394 bayes_pls_golite062009
  • active transmembrane transporter activity
    		•  1.59419818573076 bayes_pls_golite062009
  • organic acid transmembrane transporter activity
    		•  1.24937104052238 bayes_pls_golite062009
  • secondary active transmembrane transporter activity
    		•  1.22264637452409 bayes_pls_golite062009
  • binding
    		•  1.01584233411372 bayes_pls_golite062009
  • alcohol transmembrane transporter activity
    		•  0.924836669821548 bayes_pls_golite062009
  • polyol transmembrane transporter activity
    		•  0.924836669821548 bayes_pls_golite062009
  • glycerol transmembrane transporter activity
    		•  0.812001619402678 bayes_pls_golite062009
  • solute:cation symporter activity
    		•  0.74591237387473 bayes_pls_golite062009
  • symporter activity
    		•  0.74591237387473 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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