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Protein Overview: SPCC594.05c

General Information:
Name(s) found: SPCC594.05c [Sanger Pombe]
Description(s) found:
Found 19 descriptions.
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  • COMPASS complex subunit [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 424 amino acids

    Gene Ontology:
    Cellular Component: Set1C/COMPASS complex [IDALink to PubMed article]
    nucleus [IDALink to PubMed article]
    nuclear chromatin [ICLink to PubMed article]
    cytosol [IDALink to PubMed article]
    Biological Process: chromatin remodeling [ICLink to PubMed article]
    regulation of histone H3-K4 methylation [IMPLink to PubMed article]
    Molecular Function: zinc ion binding [IEA]
    small conjugating protein ligase activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MELTQENTEE NEKTHVESIV KFEDSNRGTI TDFHIETANN EEEKDANVIL NKSVKMEVEE  60
   61 VNGHVDSSST ETDIEMQVIQ QPTIPKKPPV SAHRRGPRKH RGNANSQLNL STADHQRPLY 120
  121 CICQKPDDGS WMLGCDGCED WFHGTCVNIP ESYNDLTVQY FCPKCTEEGK GITTWKRKCR 180
  181 LRECSNPTRP NSNYCSDKHG VDFFREKVKL STVEPSAIKN LVLFAKKREE FQNLGTVGPT 240
  241 LPSQVPPEVV YNFEIEEANR LNAEIVQLNK EKEVASNKKI FLQLIKDSSR RAVLAYKERE 300
  301 GIKKDLCGFD SRLLFNQQQM NELWEKVSNG APLSLDMSID PSPESTCFTE KRRCAKHTSW 360
  361 QVIFTEDFEL QESNILQKLN MKQTAKDVML EHQKQRCLPG IQYDGYARFC HEQLSPEKMA 420
  421 NLLK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..115] deduced N/A No confident structure predictions are available.
    2 View Details [116..190] PSI-BLAST 14.09691 Solution structure of PHD domain in PHF8
    3 View Details [191..299] MSA 3.209996 View MSA. No confident structure predictions are available.
    4 View Details [300..424] deduced N/A No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • histone methyltransferase activity (H3-K4 specific)
    		•  4.92637371481036 bayes_pls_golite062009
  • methylated histone residue binding
    		•  4.19057851212315 bayes_pls_golite062009
  • S-adenosylmethionine-dependent methyltransferase activity
    		•  3.36166850120952 bayes_pls_golite062009
  • histone acetyltransferase activity
    		•  3.20023500652896 bayes_pls_golite062009
  • lysine N-acetyltransferase activity
    		•  3.20023500652896 bayes_pls_golite062009
  • histone binding
    		•  3.01402804224903 bayes_pls_golite062009
  • binding
    		•  2.93415748500038 bayes_pls_golite062009
  • transcription regulator activity
    		•  2.10215685716306 bayes_pls_golite062009
  • DNA binding
    		•  2.03869452357604 bayes_pls_golite062009
  • histone methyltransferase activity
    		•  2.02130427551376 bayes_pls_golite062009
  • nucleic acid binding
    		•  1.96131140205947 bayes_pls_golite062009
  • protein deacetylase activity
    		•  1.85191754801422 bayes_pls_golite062009
  • histone deacetylase activity
    		•  1.81121374048292 bayes_pls_golite062009
  • nucleosome binding
    		•  1.69494047037058 bayes_pls_golite062009
  • protein methyltransferase activity
    		•  1.49667541832007 bayes_pls_golite062009
  • protein binding
    		•  1.42349040268084 bayes_pls_golite062009
    		• 1.38236406424542 bayes_pls_golite062009
  • protein-lysine N-methyltransferase activity
    		•  1.3339105639569 bayes_pls_golite062009
  • histone-lysine N-methyltransferase activity
    		•  1.3339105639569 bayes_pls_golite062009
  • lysine N-methyltransferase activity
    		•  1.3339105639569 bayes_pls_golite062009
  • N-acetyltransferase activity
    		•  1.19037129579681 bayes_pls_golite062009
  • transcription factor activity
    		•  1.07783732946409 bayes_pls_golite062009
  • deacetylase activity
    		•  0.912057424750107 bayes_pls_golite062009
  • N-acyltransferase activity
    		•  0.873079221910902 bayes_pls_golite062009
  • phosphotransferase activity, alcohol group as acceptor
    		•  0.655033722565177 bayes_pls_golite062009
  • kinase activity
    		•  0.596989785523293 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
    		•  0.465950484314184 bayes_pls_golite062009
  • transcription activator activity
    		•  0.412877524046899 bayes_pls_golite062009
  • protein kinase activity
    		•  0.405766438875014 bayes_pls_golite062009
  • acetyltransferase activity
    		•  0.39905022319963 bayes_pls_golite062009
  • cytoskeletal protein binding
    		•  0.327424740985033 bayes_pls_golite062009
  • transferase activity
    		•  0.245705939593188 bayes_pls_golite062009
  • transcription repressor activity
    		•  0.21967019109013 bayes_pls_golite062009
  • N-methyltransferase activity
    		•  0.137650352572163 bayes_pls_golite062009
    		• 0.0927457062201698 bayes_pls_golite062009
  • histone acetyl-lysine binding
    		•  0.0410393640547611 bayes_pls_golite062009
  • chromatin binding
    		•  0.00998492293684938 bayes_pls_golite062009
    3 No functions predicted.
    4 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle