YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: SPBC947.15c

General Information:
Name(s) found: SPBC947.15c [Sanger Pombe]
Description(s) found:
Found 19 descriptions.
SHOW ALL
  • NADH dehydrogenase [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 551 amino acids

    Gene Ontology:
    Cellular Component: mitochondrion [IDALink to PubMed article]
    mitochondrial inner membrane [ISSLink to PubMed article]
    Biological Process: generation of precursor metabolites and energy [RCALink to PubMed article]
    NADH oxidation [ISSLink to PubMed article]
    Molecular Function: NADH dehydrogenase activity [ISSLink to PubMed article]
    FAD binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSVSKARLQS VVRLSRTVPY SKTMVRSFHV SCAVKNSGNV PTPRNKSFFS RALEMAEVTS  60
   61 SLSMLGAVAL FQSLRRLNNS SPKGKSGVPK KNIVVLGSGW GAVAAIKNLD PSLYNITLVS 120
  121 PRDHFLFTPM LPSCTVGTLR LPSITEPIVA LFKGKIDPSN IHQAECTAID TSAKKVTIRG 180
  181 TTEANEGKEA VIPYDTLVFA IGAGNQTFGI QGVRDHGCFL KEAGDAKKVF NRIFEILEQV 240
  241 RFNKDLSPEE RARLLHITVV GGGPTGMEFA AEMQDFIDND VKDMFPELQK DIHVTLIEAA 300
  301 PGVLPMFTKS LITYTENLFK NLNIKIMTKT VVKDVNEKNL IVQKTNPDGS KAMQEIPYGM 360
  361 LVWAAGITAR PLTRTLMSSI PEQSGARKGL IVDEFFRVKG VPEMYAVGDC AFSGLPATAQ 420
  421 VANQQGAWLA KNLNVEGKKF ALHERIQALE KQLGEKEAPS QVAGLKQQVE QLKLEPFKYH 480
  481 HQGALAYVGD EKAIADLKLP FMKKMLPLQG IVGHTFWRLA YLNELISARS QFMVLIDWLK 540
  541 TRLFGRYDAK V

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..87] PSI-BLAST 37.69897 The Crystal Structure and Reaction Mechanism of E. coli 2,4-Dienoyl CoA Reductase
    2 View Details [88..551] PSI-BLAST 69.522879 Dihydrolipoamide dehydrogenase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • oxidoreductase activity, acting on NADH or NADPH
    		•  6.80483427531026 bayes_pls_golite062009
  • NADH dehydrogenase activity
    		•  4.48519830611958 bayes_pls_golite062009
  • oxidoreductase activity
    		•  4.24087829378489 bayes_pls_golite062009
  • hydrogen ion transmembrane transporter activity
    		•  2.23866802882306 bayes_pls_golite062009
  • monovalent inorganic cation transmembrane transporter activity
    		•  2.17680574270434 bayes_pls_golite062009
  • cation transmembrane transporter activity
    		•  2.12428437083016 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  2.08195722912776 bayes_pls_golite062009
  • inorganic cation transmembrane transporter activity
    		•  2.04920820091696 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  1.9459068794385 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  1.9173550230784 bayes_pls_golite062009
  • dihydrolipoyl dehydrogenase activity
    		•  1.6187224316494 bayes_pls_golite062009
  • oxygen-dependent protoporphyrinogen oxidase activity
    		•  1.59912481901166 bayes_pls_golite062009
  • catalytic activity
    		•  1.56773888754354 bayes_pls_golite062009
  • oxidoreductase activity, acting on sulfur group of donors, NAD or NADP as acceptor
    		•  1.45104542724719 bayes_pls_golite062009
  • oxidoreductase activity, acting on sulfur group of donors
    		•  1.31328088143083 bayes_pls_golite062009
  • protein binding
    		•  1.16738144711505 bayes_pls_golite062009
  • binding
    		•  0.993436593091194 bayes_pls_golite062009
  • NADPH-adrenodoxin reductase activity
    		•  0.689874846468951 bayes_pls_golite062009
  • oxidoreductase activity, acting on the CH-CH group of donors
    		•  0.36771673037999 bayes_pls_golite062009
  • glutathione-disulfide reductase activity
    		•  0.33334782799369 bayes_pls_golite062009
  • lipoamide binding
    		•  0.193025676337591 bayes_pls_golite062009
  • oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
    		•  0.18455498413733 bayes_pls_golite062009
  • coenzyme binding
    		•  0.146916113354806 bayes_pls_golite062009
  • cofactor binding
    		•  0.0578189575854124 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.54

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle