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Protein Overview: SPAC25B8.05

General Information:
Name(s) found: SPAC25B8.05 [Sanger Pombe]
Description(s) found:
Found 20 descriptions.
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  • pseudouridylate synthase [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 450 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article][ISSLink to PubMed article]
    cytoplasm [ISSLink to PubMed article]
    cytosol [IDALink to PubMed article]
    Biological Process: tRNA pseudouridine synthesis [ISSLink to PubMed article]
    Molecular Function: RNA binding [IEA]
    lyase activity [IEA]
    pseudouridine synthase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPASKYAGWS RDQLISRILE LDGKLQKNTN SLPNKEIEGK NEVIKNKNKL DNGNEIEPQH  60
   61 LSQELVLQHA LQDASSLPKL KPVRPFQLEK TVFVAFKFAY CGWNYNGLAY QLEPTPLPTV 120
  121 EGKVFEALLR AHLITDPSSC SFSRCGRTDK GVSAMGQVIS LNVRHSERRP IIYCDVLNRL 180
  181 LPADIRITGY AFPPEGFDAR FSCKQRHYKY LFTKDYPGGS LDIDRMNEAA ALYLGEHDFR 240
  241 NFCKIDASKQ ITNYHRRILS SKVICIDPST GLYAFDLQGT AFLWHQVRCM MAILFLIGQK 300
  301 LEPASLINDL LDIKKVPTKP IYDMASEYPL ILYDCDFDNI EWTLPTDSPT TAPRIAKHTY 360
  361 ETIYHQWHSL RIREQIASFM LDIADHNVKR YGKSEESSST MNVGEGLLKR TKKYIPILSR 420
  421 QRQESVEVVN ERYKRKKGLK DSDVKSENIK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..90] deduced N/A No confident structure predictions are available.
    2 View Details [91..344] PSI-BLAST 81.30103 No description for 2nqpA was found.
    3 View Details [345..450] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle