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View Structure Prediction Details

Protein: SPAC25B8.05
Organism: Schizosaccharomyces pombe
Length: 450 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPAC25B8.05.

Description E-value Query
Range
Subject
Range
gi|31542636, gi|... - gi|31542636|ref|NP_112597.2| pseudouridylate synthase 3 [Homo sapiens], gi|14919399|gb|AAH04822.1| P...
gi|157928602, gi... - gi|157929242|gb|ABW03906.1| pseudouridylate synthase 3 [synthetic construct], gi|157928602|gb|ABW035...
394.0 [0..23] [440..5]
gi|114641137 - gi|114641137|ref|XP_001148378.1| PREDICTED: pseudouridylate synthase 3 [Pan troglodytes]
393.0 [0..23] [440..5]
gi|31981121, gi|... - gi|31981121|ref|NP_075781.2| pseudouridine synthase 3 [Mus musculus], gi|26347775|dbj|BAC37536.1| un...
392.0 [0..22] [440..3]
gi|109109191 - gi|109109191|ref|XP_001111887.1| PREDICTED: pseudouridylate synthase 3 [Macaca mulatta]
392.0 [0..22] [440..3]
gi|44985876 - gi|44985876|gb|AAS54487.1| AGL003Wp [Ashbya gossypii ATCC 10895]
gi|44985876, gi|... - gi|45201093|ref|NP_986663.1| AGL003Wp [Ashbya gossypii ATCC 10895], gi|44985876|gb|AAS54487.1| AGL00...
391.0 [0..5] [439..21]

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Predicted Domain #1
Region A:
Residues: [1-90]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPASKYAGWS RDQLISRILE LDGKLQKNTN SLPNKEIEGK NEVIKNKNKL DNGNEIEPQH  60
   61 LSQELVLQHA LQDASSLPKL KPVRPFQLEK 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [91-344]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TVFVAFKFAY CGWNYNGLAY QLEPTPLPTV EGKVFEALLR AHLITDPSSC SFSRCGRTDK  60
   61 GVSAMGQVIS LNVRHSERRP IIYCDVLNRL LPADIRITGY AFPPEGFDAR FSCKQRHYKY 120
  121 LFTKDYPGGS LDIDRMNEAA ALYLGEHDFR NFCKIDASKQ ITNYHRRILS SKVICIDPST 180
  181 GLYAFDLQGT AFLWHQVRCM MAILFLIGQK LEPASLINDL LDIKKVPTKP IYDMASEYPL 240
  241 ILYDCDFDNI EWTL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 81.30103
Match: 2nqpA
Description: No description for 2nqpA was found.

Predicted Domain #3
Region A:
Residues: [345-450]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PTDSPTTAPR IAKHTYETIY HQWHSLRIRE QIASFMLDIA DHNVKRYGKS EESSSTMNVG  60
   61 EGLLKRTKKY IPILSRQRQE SVEVVNERYK RKKGLKDSDV KSENIK

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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