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Protein Overview: SPBC2D10.04

General Information:
Name(s) found: SPBC2D10.04 [Sanger Pombe]
Description(s) found:
Found 17 descriptions.
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  • arrestin Aly1 related [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 658 amino acids

    Gene Ontology:
    Cellular Component: cell division site [IDALink to PubMed article]
    cell tip [IDALink to PubMed article]
    cytoplasm [IDALink to PubMed article][ISSLink to PubMed article]
    cytosol [IDALink to PubMed article]
    Biological Process: regulation of signal transduction [ISS]
    Molecular Function: calcium ion binding [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRGELNIPAL SRFGKSISAS LHHQNGSSRD DNDSNPYENR SSNSGLNRRN SVFGLPSSGL  60
   61 SSRLSKPSLS SINNSNNSSS NTGGNVLPNP ALTPVRNMSN KPPLTWSPSS ANLFGTSKVT 120
  121 SIIGNNVSDV VPPVIKKALA SSHGGGMSLS IVLLEPVLYL AGFDLNECQI ENPALLRGAL 180
  181 VLRVAKPANI RGISLSFTGR SRTEWPEGIP VKGHDTYEDK VIISHNWKFY EPTMKDADAP 240
  241 QHGADVARLV GEQLPLPSSA AASLRGYSVF APGEYTYNFD LAIPNCFPES VEAKMGWVRY 300
  301 FLEATVERFG TFKSNLNGRT PVQLVRTPSP ASLSSSELIN ISRDWDERLH YELQVSGKSF 360
  361 RLGEVVPITF RFLLLDKVRL YKLSISVVES SEYWCRSRKF HRVDPKRRVL LAERSAKHQN 420
  421 TDNLFETPDE GDGLSSAVFN FNVALPTCLV KERDRLTFDT TYKYIKVRHR LKALLVLSIE 480
  481 NTENPEKRKY FEINIETPVR ILSCRCVKDS TLLPPYESSS QGDNQVLLPC PCRLATTHVE 540
  541 PTEVTAFTTQ SVLASSAPSA GRPAAAQISR PAQLFRIPST NPPPFDGDVC PPACNTPPPN 600
  601 YDELFDVLSS ISIQDCETDR ANDDTILNNR VRRSGTIREE APHRSLSRTV SRSFEIPR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..161] deduced N/A No confident structure predictions are available.
    2 View Details [162..580] PSI-BLAST 69.221849 Arrestin
    3 View Details [581..658] MSA 2.124996 View MSA. No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • binding
    		•  2.01555579124143 bayes_pls_golite062009
  • protein binding
    		•  1.50286160643298 bayes_pls_golite062009
  • ligand-gated ion channel activity
    		•  0.0676214219421661 bayes_pls_golite062009
  • ligand-gated channel activity
    		•  0.0676214219421661 bayes_pls_golite062009
  • cation channel activity
    		•  0.0318083563912285 bayes_pls_golite062009
    3 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.93

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle