| Protein: | SPBC2D10.04 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 658 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPBC2D10.04.
| Description | E-value | Query Range |
Subject Range |
|
|
347.0 | [0..17] | [658..60] |
|
|
346.0 | [0..12] | [658..68] |
|
|
337.0 | [0..154] | [640..1] |
|
|
330.0 | [0..22] | [658..196] |
|
|
324.0 | [0..28] | [654..150] |
|
|
318.0 | [0..17] | [658..60] |
|
|
317.0 | [0..17] | [658..63] |
|
|
308.0 | [0..17] | [658..71] |
|
Region A: Residues: [1-161] |
1 11 21 31 41 51
| | | | | |
1 MRGELNIPAL SRFGKSISAS LHHQNGSSRD DNDSNPYENR SSNSGLNRRN SVFGLPSSGL 60
61 SSRLSKPSLS SINNSNNSSS NTGGNVLPNP ALTPVRNMSN KPPLTWSPSS ANLFGTSKVT 120
121 SIIGNNVSDV VPPVIKKALA SSHGGGMSLS IVLLEPVLYL A
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [162-580] |
1 11 21 31 41 51
| | | | | |
1 GFDLNECQIE NPALLRGALV LRVAKPANIR GISLSFTGRS RTEWPEGIPV KGHDTYEDKV 60
61 IISHNWKFYE PTMKDADAPQ HGADVARLVG EQLPLPSSAA ASLRGYSVFA PGEYTYNFDL 120
121 AIPNCFPESV EAKMGWVRYF LEATVERFGT FKSNLNGRTP VQLVRTPSPA SLSSSELINI 180
181 SRDWDERLHY ELQVSGKSFR LGEVVPITFR FLLLDKVRLY KLSISVVESS EYWCRSRKFH 240
241 RVDPKRRVLL AERSAKHQNT DNLFETPDEG DGLSSAVFNF NVALPTCLVK ERDRLTFDTT 300
301 YKYIKVRHRL KALLVLSIEN TENPEKRKYF EINIETPVRI LSCRCVKDST LLPPYESSSQ 360
361 GDNQVLLPCP CRLATTHVEP TEVTAFTTQS VLASSAPSAG RPAAAQISRP AQLFRIPST
|
| Detection Method: | |
| Confidence: | 69.221849 |
| Match: | 1jsyA |
| Description: | Arrestin |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 2.01555579124143 | bayes_pls_golite062009 |
| protein binding | 1.50286160643298 | bayes_pls_golite062009 |
| ligand-gated ion channel activity | 0.0676214219421661 | bayes_pls_golite062009 |
| ligand-gated channel activity | 0.0676214219421661 | bayes_pls_golite062009 |
| cation channel activity | 0.0318083563912285 | bayes_pls_golite062009 |
|
Region A: Residues: [581-658] |
1 11 21 31 41 51
| | | | | |
1 NPPPFDGDVC PPACNTPPPN YDELFDVLSS ISIQDCETDR ANDDTILNNR VRRSGTIREE 60
61 APHRSLSRTV SRSFEIPR
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
