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Protein Overview: vac8

General Information:
Name(s) found: vac8 / SPBC354.14c [Sanger Pombe]
Description(s) found:
Found 18 descriptions.
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  • vacuolar protein Vac8 [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 550 amino acids

    Gene Ontology:
    Cellular Component: fungal-type vacuole membrane [IDALink to PubMed article]
    Golgi apparatus [IDALink to PubMed article]
    protein complex [RCALink to PubMed article]
    fungal-type vacuole [ISSLink to PubMed article]
    anchored to membrane [IEA]
    Biological Process: vacuole inheritance [ISSLink to PubMed article]
    vacuole fusion, non-autophagic [ISSLink to PubMed article]
    protein targeting to vacuole [ISSLink to PubMed article]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGNCLSCCEK SKDEQYEPLL ADREREAVAD LLSFLEDRNE VNFYSEEPLR ALTILAYSDN  60
   61 LDLQRSAALA FAEITEKDVR EVDRETIEPV LFLLQSPDAE IQRAASVALG NLAVNAENKA 120
  121 LVVKLNGLDL LIRQMMSPHV EVQCNAVGCI TNLATLDENK SKIAHSGALG PLTRLAKSKD 180
  181 IRVQRNATGA LLNMTHSYEN RQQLVSAGTI PVLVSLLPSS DTDVQYYCTT SISNIAVDAV 240
  241 HRKRLAQSEP KLVRSLIQLM DTSSPKVQCQ AALALRNLAS DERYQIEIVQ SNALPSLLRL 300
  301 LRSSYLPLIL ASVACIRNIS IHPLNESPII DAGFLRPLVD LLSCTENEEI QCHAVSTLRN 360
  361 LAASSERNKR AIIEANAIQK LRCLILDAPV SVQSEMTACL AVLALSDEFK SYLLNFGICN 420
  421 VLIPLTDSMS IEVQGNSAAA LGNLSSNVDD YSRFIECWDS PAGGIHGYLV RFLSSEDSTF 480
  481 AHIAAWTIVQ LLEAGVPRLT AFIQSSDDII ELLNDIVARD ANNGEYEDGE GDVILLSGRA 540
  541 LHLIEQDTDS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..550] PSI-BLAST 44.69897 beta-Catenin

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • protein transporter activity
    		•  3.09219467906677 bayes_pls_golite062009
  • binding
    		•  2.48958374349477 bayes_pls_golite062009
  • transporter activity
    		•  2.48700774379895 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  2.01243877392722 bayes_pls_golite062009
  • protein binding
    		•  1.94427330399472 bayes_pls_golite062009
  • clathrin binding
    		•  1.82663703481803 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  1.28481004323799 bayes_pls_golite062009
  • protein transmembrane transporter activity
    		•  1.27438167414302 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  0.851483195437252 bayes_pls_golite062009
  • nuclear localization sequence binding
    		•  0.661470469730249 bayes_pls_golite062009
  • hydrolase activity
    		•  0.610187344532862 bayes_pls_golite062009
  • signal sequence binding
    		•  0.57106697498903 bayes_pls_golite062009
  • active transmembrane transporter activity
    		•  0.252495966234234 bayes_pls_golite062009
  • primary active transmembrane transporter activity
    		•  0.00492507437049428 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.92

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle