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Protein Overview: SPCC576.05

General Information:
Name(s) found: SPCC576.05 [Sanger Pombe]
Description(s) found:
Found 18 descriptions.
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  • nucear export factor [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 1024 amino acids

    Gene Ontology:
    Cellular Component: nuclear envelope [IDALink to PubMed article]
    nucleus [IDALink to PubMed article]
    cytosol [IDALink to PubMed article]
    nuclear pore [ISSLink to PubMed article]
    Biological Process: mRNA export from nucleus [ISSLink to PubMed article]
    protein export from nucleus [ISSLink to PubMed article]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEKRNETGNN RLKRSNNRGK SKKDWKDASV ETTPRETSVD EDNTSVFEDV EAQDSRQKRF  60
   61 SSTLEGNRFE ELRSLREKER EVAIQNGLID DPTKPRQLDE AVTFVGTCPD MCPEYEREQR 120
  121 EYQNNLERWE INPETGRVDK NLAVKAFHRP AAGNEQALPS DVRPPPVLKK SLDYLVDKIV 180
  181 CGPDPLENTH FFVRDRTRSI RQDFTLQNCR DLDAVACHER IARYHILCIH QLCEKKQFSA 240
  241 QQEVEQLRKG ILQSLCEFYD DLRKVKIRCP NEPEFRSYAI ITHLRDPDVV RQSQILPIEI 300
  301 FDDQRVQLAL RLSALAQKNN ERVGHILPRN TEACPNLYTR FFKLVQSPAV TYLMACLLES 360
  361 HFMSIRKGAL KAMRKAFMSA HANFPCGDLK RILHFDTVEQ AASFSRYYGL EVSDDNGELS 420
  421 INLNKTAFFN DSKPDFRQLF SQTLVESKLQ NRSFADIING SRYNIDRVSP NTAFSTNIPL 480
  481 SLPFANKEPQ PIAGFKKNTP ETSVVSKNLS TFNGKFNVNA PVFTPRSFPT KPFSATDISS 540
  541 VQPTNLPNGS TNGTETFIPP VQNSITSNKE AVKPIKNKPK PISFESLSAV GNLIISDSLS 600
  601 RIVRQILQNL YTEWVHEKTN LVFATMFRTI FREVLLDGIA SEVYLKSLKK HAISQISVRA 660
  661 HHSWVKKQEK MMLEMREKNR QEKYFSVLNS VVKAESSNIT RLPIKRTFYG DTRNLDKASE 720
  721 KLRAEHDRTR RLWKPVLMDS LFSNLQKFPV YEDWHLLIFN ASTSSMMKTW LCAKFSLKET 780
  781 NKTSFWHSSY NLFNRQYHVD MPDNVSDLPQ TRLCYGACVY NVGLLDEEKR KDLANSDLNS 840
  841 SPKLIQGNDS RSAHESSANK LFSFVHDISR LTITKLPLLL IFWSDSNLDM QGITQKYRFL 900
  901 ELITSTWSAI SSIHVLTITN DRDMDLEHSL KVLLDNVTVE KSPFAQLEEL EVVRKKREAE 960
  961 IEASSKTVKR LASNNKFLTD SNVEGLLEAP TSLENSLVED DKWASLRQKI KAARDLLKKV1020
 1021 ETFY

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..152] MSA 1.106989 View MSA. No confident structure predictions are available.
    2 View Details [153..320] deduced N/A No confident structure predictions are available.
    3 View Details [321..432] deduced N/A Confident ab initio structure predictions are available.
    4 View Details [433..619] MSA 13.235997 View MSA. No confident structure predictions are available.
    5 View Details [620..777] deduced N/A No confident structure predictions are available.
    6 View Details [778..924] MSA 1.00897 View MSA. No confident structure predictions are available.
    7 View Details [925..1024] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle