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Protein Overview: SPAC343.13

General Information:
Name(s) found: SPAC343.13 [Sanger Pombe]
Description(s) found:
Found 18 descriptions.
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  • glutamyl-tRNA amidotransferase [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 526 amino acids

    Gene Ontology:
    Cellular Component: mitochondrion [IDALink to PubMed article][ISSLink to PubMed article]
    Biological Process: mitochondrial translation [ISS]
    tRNA modification [ISSLink to PubMed article]
    Molecular Function: ATP binding [IEA]
    carbon-nitrogen ligase activity, with glutamine as amido-N-donor [IEA]
    ligase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSFGRWAASI GLEIHLQLAT VKKLFSPAKV NPLAQPNTCV AYFDVSLPGS MPILNPEALK  60
   61 FAVKGALALN CEVANVCKFD RKHYFYPDLP AGYQITQKEI PIGRNGFIPL SAGLDNVPDT 120
  121 QIPIQHIQLE QDTAKSTSAK NPSRILLDYN RAGTPLLEIV TKPCFHDVNT VSAFLFKLQS 180
  181 IVRFAGISEA LMENGGMRCD VNVSIAPVIS SENLNELHFK NNGVISVEKS ISHFPQLGTQ 240
  241 LARVELKNLS NVRNVVNSIR HEVDRQVSLA NMGVSWPSET RGFDDITGKT FPLRNKTTSD 300
  301 DYLFLPETDI PPIILSRSYV NSVLKSLPAL PDELFQKLTT GSHAISHKEA RTLLSVKEYY 360
  361 HYYRNAYHHI DSISHVNQSL KEDALRTLPY WITVELVGKV REIDPSPNIN IVPPLQLADI 420
  421 VLLVSKKKLT AASAKLFLRS LIKSPSSKPI STLIQEKNFG TIGDSEKIKA CVESVLSKHS 480
  481 KQFEELKNGK TSLIKWFVGL TMRELRGQAS PKDIEMEVQS SLRREK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..526] PSI-BLAST 1000.0 No description for 2df4B was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • ligase activity
    		•  5.28014676041088 bayes_pls_golite062009
  • catalytic activity
    		•  1.08973967683802 bayes_pls_golite062009
  • binding
    		•  1.0468360119595 bayes_pls_golite062009
  • ammonia ligase activity
    		•  0.978763138251862 bayes_pls_golite062009
  • glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity
    		•  0.873485093374459 bayes_pls_golite062009
  • acid-ammonia (or amide) ligase activity
    		•  0.632807059205458 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.545649763280687 bayes_pls_golite062009
  • protein binding
    		•  0.440356087696859 bayes_pls_golite062009
  • kinase activity
    		•  0.21984983699175 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
    		•  0.132389278472779 bayes_pls_golite062009
  • ligase activity, forming carbon-nitrogen bonds
    		•  0.0373860162850559 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.94

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle