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Protein Overview: SPBC337.11

General Information:
Name(s) found: SPBC337.11 [Sanger Pombe]
Description(s) found:
Found 18 descriptions.
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  • mitochondrial peptidase [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 325 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    cytoplasm [IDALink to PubMed article][ISSLink to PubMed article]
    cytosol [IDALink to PubMed article]
    mitochondrial inner membrane [ISSLink to PubMed article]
    Biological Process: biological_process [ND]
    Molecular Function: zinc ion binding [IEA]
    peptidase activity [ISSLink to PubMed article]
    alcohol dehydrogenase activity, zinc-dependent [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQYYQMMKAL RMLKKPKPGC LGIEIQSVPI PQPKNGELLV KIEAAAINPS DLMNATGGFP  60
   61 YTVYPRIVGR DYAGTVISGA SHLVGTRVFG TSGSELSFTK DGTHAEYCII PEKAAVRMPS 120
  121 NLSFTEAASV GVPFTTAYLA LSRGETKGSD IVLVVGALGA VGSAVCQIAE DWGCKVITVS 180
  181 RSGSTDINTV VDPELKRVHE LVEKVDVVID TVGDPLLMKS ALNQLGIGGR LSYISAPKQG 240
  241 SIEFSYDMKQ IYRKNLKIIG CNSLLLSLVE SNSLLKNMVA KFEAGKYKVL NKKIAETSLT 300
  301 DECINSYRKL MNECSTKFVI TMSTN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..325] PSI-BLAST 68.30103 CRYSTAL STRUCTURE OF NAD(+)-DEPENDENT ALCOHOL DEHYDROGENASE FROM BACILLUS STEAROTHERMOPHILUS STRAIN LLD-R

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • oxidoreductase activity
    		•  2.38343643417648 bayes_pls_golite062009
  • binding
    		•  1.57459853671728 bayes_pls_golite062009
  • oxidoreductase activity, acting on CH-OH group of donors
    		•  1.30535930879645 bayes_pls_golite062009
  • oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor
    		•  1.22416351603098 bayes_pls_golite062009
  • oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
    		•  1.22202241547461 bayes_pls_golite062009
  • alcohol dehydrogenase (NAD) activity
    		•  0.861534636764975 bayes_pls_golite062009
  • monovalent inorganic cation transmembrane transporter activity
    		•  0.576163737662951 bayes_pls_golite062009
  • alcohol dehydrogenase activity, zinc-dependent
    		•  0.558610278939188 bayes_pls_golite062009
  • oxidoreductase activity, acting on NADH or NADPH
    		•  0.51503848775098 bayes_pls_golite062009
  • protein binding
    		•  0.417403352171849 bayes_pls_golite062009
  • catalytic activity
    		•  0.217171374336363 bayes_pls_golite062009
  • inorganic cation transmembrane transporter activity
    		•  0.0913823272876781 bayes_pls_golite062009
  • chaperone binding
    		•  0.0748751300531033 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.89

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle