Protein Overview: SPAC7D4.12c

General Information:
Name(s) found:	SPAC7D4.12c [Sanger Pombe]
Description(s) found: Found 18 descriptions. SHOW ALL	DUF1212 family protein [Sanger Pombe]
Organism:	Schizosaccharomyces pombe
Length:	759 amino acids
Gene Ontology:
Cellular Component:	integral to membrane [IEA] endoplasmic reticulum [IDA]
Biological Process:	biological_process [ND]
Molecular Function:	molecular_function [ND]

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDGNRRVRFN TDRRPYLSPL QTSFPSSTSF QTPTFLIEED DEDTEDDDGP QVLPVHRAPS  60
   61 PAAFRKRGSI TSMDQYLVNM PAVPSPTASK VGLLDARNTD VESYAASYKT QSSSNSVNSL 120
  121 PMRRPTLDRS YSAPMIAAKN LQSDPEKMSN VESTNELPST TTEAYKLVAA HTAARLEHMR 180
  181 LNALKAANDE GEDVKDNEQD DNIDESDPFA NPKASYRGGV LSNLLKLYTN SNTVTSSRIS 240
  241 LKHTDPTKWQ KHAKRTASSN SLTDLLHASN QTFMAPASGL QSTEEIPQFS KTGHSRGRKF 300
  301 NFHHHSRKNS GLNEEYKITI HLADILQRQK YILKLCRALM VYGAPSHRLE EHMASAAKVL 360
  361 EIEGQFLYIP GCMIVSFGDV NTHTSDMHIV RVNQTIDLGR LKLVHDIYKA VLHDRMGVEE 420
  421 AIRGLDEIFK SPPYFRTWIL VVFYGFASAT ILPMSFQGGW IDLPIAFILG CLVGILQHYI 480
  481 APRSTMYNSL FEVTGSIITS FLSRAFGSIR YSGGRRFCFS ALAEGAIVLI LPGYIVLCGS 540
  541 LELQSKNIVA GGVRMFYAII YSLFLSFGIS IGAALYGWMD HNATDSTSCP VSTQMDDKWK 600
  601 ILFVPLFTLC LLIVNQARPS QWPVSIFISC AGYVVNYFTA KHFGSNPIAN AIGSFAIGCL 660
  661 GNIYSRLGRG VAFAAVLPAI FVQVPSGLAA QGGISSGIEV ATSLTNNTYN TSSSSTLDVN 720
  721 SLKFGLVMVQ IAIGISVGLF ASALVVYPFG KRRSGLFSF

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Searching the YRC Public Image Repository, found results:

Currently showing to of results.

[View Search in the YRC Public Image Repository]

Searching the YRC Public Image Repository, found no results.

Ginzu Version Information

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

Gene Ontology predictions

No functions predicted.

Term	Confidence	Notes
cation transmembrane transporter activity	3.37551746791562	bayes_pls_golite062009
ion transmembrane transporter activity	2.46309977364589	bayes_pls_golite062009
inorganic cation transmembrane transporter activity	2.43363909456767	bayes_pls_golite062009
organic cation transmembrane transporter activity	2.28889582696925	bayes_pls_golite062009
ammonium transmembrane transporter activity	2.28258580483562	bayes_pls_golite062009
substrate-specific transmembrane transporter activity	2.24340667591076	bayes_pls_golite062009
substrate-specific transporter activity	2.13062477643948	bayes_pls_golite062009
transmembrane transporter activity	1.91632548941379	bayes_pls_golite062009
transporter activity	1.87457067022308	bayes_pls_golite062009

Source: Reynolds et al. 2008. Manuscript submitted

#		Region(s)	Method	Confidence	Match Description
1	View Details	[1..116]	MSA	4.297996	View MSA. No confident structure predictions are available.
2	View Details	[117..313]	deduced	N/A	No confident structure predictions are available.
3	View Details	[314..416]	deduced	N/A	Confident ab initio structure predictions are available.
4	View Details	[417..759]	PSI-BLAST	66.0	No description for 2nuuA was found.

Protein Overview: SPAC7D4.12c

Protein Complex Data

Mass Spectrometry Data

Yeast Two-Hybrid Data

Microscopy / Localization Data

Protein Structure Data

Philius Transmembrane Prediction: