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Protein Overview: SPCC70.06

General Information:
Name(s) found: SPCC70.06 [Sanger Pombe]
Description(s) found:
Found 17 descriptions.
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  • nuclear export factor [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 458 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    cytosol [IDALink to PubMed article]
    nucleolus [IDALink to PubMed article]
    nuclear pore [ISSLink to PubMed article]
    Biological Process: mRNA export from nucleus [ISSLink to PubMed article]
    protein export from nucleus [ISSLink to PubMed article]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTKVKQKQK QKHRPKPSLD RSDSTKRAAR AARFSTTLDA NFQALKKKRK DEQESFQAKQ  60
   61 STNWEKSSVL VGTCRQMCPE FELEERKLQH AIHPYELDPV SKQAHPSLAV KAYHRPAAGK 120
  121 GPILPSDVRP PSILKNTIDY LFKVILDRYS LREAHAFVRD RTRAVRQDFS VQSSFSQDSV 180
  181 YCHELIARFH IISLHELAHT PNFSRQQEIE QLSKSMEILY TLGQLYDYMH LRKEHCTHEA 240
  241 EFRAYMVLLS LGDPSVGLDT LSWPDFVFKK PIVKTSLKLY SLAQRNNHTI TTSNSISLSL 300
  301 VSSFNTEATS NLYTRFFKIA SSFRVSYLMG CLLDLFVPSI RTGALKAMKK CYLSAHSNIP 360
  361 FKDLMKILAA TSEDELVQCC KMHGLKIEYI GEQPSAVVLN RKTVITEPLL SSEISCRFAD 420
  421 EKKPGTNVSD LICLDTDGSS LHRKKPKLFK KRSIVRQR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..147] MSA 1.047993 View MSA. No confident structure predictions are available.
    2 View Details [148..252] MSA 1.050976 View MSA. Confident ab initio structure predictions are available.
    3 View Details [253..458] MSA 1.050981 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.88

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle