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Protein Overview: SPBC1348.01, SPB...

General Information:
Name(s) found: SPBCPT2R1.01c [Sanger Pombe]
SPBC1348.01 [Sanger Pombe]
Description(s) found:
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  • gi|8452759|emb|CAB94268.1| S. pombe specific DUF999 protein family 5 [Schizosaccharomyces pombe] [NCBI NR]
  • gi|74625015|sp|Q9P3V9.1|YI41_SCHPO RecName: Full=UPF0494 membrane protein C1348.01/CPT2R1.01c [NCBI NR]
  • gi|38304076|emb|CAE54416.1| SPBCPT2R1.01c [Schizosaccharomyces pombe] [NCBI NR]
  • gi|19113675|ref|NP_592763.1| S. pombe specific DUF999 protein family 5 [Schizosaccharomyces pombe 972h-] [NCBI NR]
  • gi|19113658|ref|NP_596866.1| hypothetical protein SPBPB2B2.20c [Schizosaccharomyces pombe 972h-] [NCBI NR]
  • gi|162312339|ref|XP_001713154.1| DUF999 protein family 9 [Schizosaccharomyces pombe] [NCBI NR]
  • gi|157310478|emb|CAO77670.1| S. pombe specific DUF999 protein family 9 [Schizosaccharomyces pombe] [NCBI NR]
  • gi|12056503|emb|CAC21422.1| SPBPB2B2.20c [Schizosaccharomyces pombe] [NCBI NR]
  • S. pombe specific DUF999 protein family 9 [Sanger Pombe]
  • S. pombe specific DUF999 protein family 5 [Sanger Pombe]
  • UPF0494 membrane protein C1348.01/CPT2R1.01c OS=Schizosaccharomyces pombe GN=SPBC1348.01 PE=2 SV=1 [Swiss-Prot]
  • HYPOTHETICAL PROTEIN; DUPLICATED TELOMERIC REGION; CONTAINS 4 PREDICTED TRANSMEMBRANE HELICES; POSSIBLY S. POMBE SPECIFIC; HAS LATE LOG PHASE CDNA; HIGHLY SIMILAR TO S. POMBE SPAC212.01C; HIGHLY SIMILAR TO S. POMBE SPAC1348.07: Q9P3V9; [pompepVF.fasta]
  • HYPOTHETICAL PROTEIN; DUPLICATED TELOMERIC REGION; POSSIBLY S. POMBE SPECIFIC; POSSIBLY PSEUDO; CONTAINS 4 PREDICTED TRANSMEMBRANE HELICES: Q9P3V9; [pompepVF.fasta]
  • HYPOTHETICAL PROTEIN; DUPLICATED TELOMERIC REGION; HAS 4 PREDICTED TRANSMEMBRANE HELIX; POSSIBLY S. POMBE SPECIFIC; HAS LATE LOG PHASE CDNA; HIGHLY SIMILAR TO S. POMBE SPAC212.01C; HIGHLY SIMILAR TO S. POMBE SPAC1348.07: Q9P3V9; [pompepV13]
  • HYPOTHETICAL PROTEIN; DUPLICATED TELOMERIC REGION; POSSIBLY S. POMBE SPECIFIC; POSSIBLY PSEUDO; 4 PREDICTED TRANSMEMBRANE HELICES: Q9P3V9; [pompepV13]
  • Very hypothetical protein-duplicated region (Very hypothetical protein-duplicated telomeric egion) [pompep4896]
  • |||hypothetical protein [pompepnew.fasta]
  • SPBC1348.01 protein (Spac1348.01 protein) (SPBPB2B2.20c protein) (SPBCPT2R1.01c protein) [4896.FASTAC]
  • ||SPAC1348.01|DUF999|Schizosaccharomyces pombe|chr 2|||Manual [pombe041504.fasta]
  • ||SPBPB2B2.20c|DUF999|Schizosaccharomyces pombe|chr 2|||Manual [pombe041504.fasta]
  • very hypothetical protein-duplicated telomeric egion [Schizosaccharomyces pombe]gi|19113675|ref|NP_592763.1| very hypothetical protein-duplicated region [Schizosaccharomyces pombe]gi|12056503|emb|CAC21422.1| SPBPB2B2.20c [Schizosaccharomyces pombe]gi|8 [nrdb_11152004_Chlamydomonas]
  • (Q9P3V9) Very hypothetical protein-duplicated region (Very hypothetical protein-duplicated telomeric egion) [pompep4896_normal_reversed]
  • |||S. pombe specific DUF999 protein family 5|Schizosaccharomyces pombe|chr 2|||Manual [SGD_S-Pombe_na_10-23-2009_con_reversed.fasta]
  • ||SPBPB2B2.20c|S. pombe specific DUF999 protein family 9|Schizosaccharomyces pombe|chr 2|||Manual [SGD_S-Pombe_na_10-23-2009_con_reversed.fasta]
  • hypothetical protein SPBC1348.01 [Schizosaccharomyces pombe 972h-] [nr-271106-contam.fasta]
  • SPBPB2B2.20c [Schizosaccharomyces pombe] [nr-271106-contam.fasta]
  • SPAC1348.01 [Schizosaccharomyces pombe] [nr-271106-contam.fasta]
  • SPBCPT2R1.01c [Schizosaccharomyces pombe] [nr-271106-contam.fasta]
  • UPF0494 membrane protein C1348.01 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1348.01 PE=3 SV=1 [uniprot_sprot.fasta.20160308]
    • Organism: Schizosaccharomyces pombe
    Length: 269 amino acids

    Gene Ontology:
    Cellular Component: external side of plasma membrane [NASLink to PubMed article]
    integral to membrane [IEA]
    fungal-type vacuole [IDALink to PubMed article]
    Biological Process: biological_process [ND]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNPESLKKQ VEPPGYNELF MVEDVCNVDL EQGLDLCKPE KVNKQSQRSR QSRQSLFTNT  60
   61 IKPQKDKMNI KTNKIKEFLN DLFTEFSKFH NSYYPDGRIS TRSNFRWPLL IIWSIIIVFA 120
  121 VDKKFEVQKF LSIWINENRF YSEIWVPIAI YVCLLVLMLL SLIFFAEFAV LALRVTGVII 180
  181 AVLGMIIAVL GMIIAALGAT ITGLLYFGHW ALYKLVILSL GFKIVTPGDV CVSNTLPTHN 240
  241 GETALHSETT VGSDIEQIEL QNMPTPVKK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..163] Pfam 113.886057 No description for PF06198.2 was found. No confident structure predictions are available.
    2 View Details [164..269] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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