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Protein Overview: SPBC21B10.09

General Information:
Name(s) found: SPBC21B10.09 [Sanger Pombe]
Description(s) found:
Found 19 descriptions.
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  • acetyl-CoA transporter [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 519 amino acids

    Gene Ontology:
    Cellular Component: cytoplasm [IDALink to PubMed article]
    membrane [ISSLink to PubMed article]
    integral to membrane [IEA]
    Golgi apparatus [IDALink to PubMed article]
    Biological Process: transmembrane transport [RCALink to PubMed article]
    acetyl-CoA transport [ISSLink to PubMed article]
    Molecular Function: transmembrane transporter activity [RCALink to PubMed article]
    acetyl-CoA transporter activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVFKAHHRSI TRQDIELEDL ENAPASIASI ENDTLEANVG STPLTAKQKR NIYFLILLYL  60
   61 IQGVPMGLVR GSIPYFLKPN VSYSDLATYS LAAYPYSLKV LWSPIVDTYY CRSFGRRKTW 120
  121 VVPCMLLISS TLLLFSYNVD TWISKGSSYI NSFTTWSFLL VFVCATQDIA VDGWSLNMLN 180
  181 PEQLSYASTA QTVGLNTGFF LSFTILLVFT SPEFANTFIR SIPSNEGLIT LSGYIKFWAY 240
  241 FTFIASVLVC FWDESNHQEI ANISDMWKTI RAALSLKNMR QLLIVHTLGK VGFVANETLT 300
  301 LLKATEFGLS NEMLSLIILI NFPLGLALGV YTGRISNYRP LDIWLKGYWG RVVSILLNTI 360
  361 LVYMVSNWKH RFPVFFPIFL CYTLNASFST IQFVALGVFH SKISDPHIGG TYMTILNTLS 420
  421 NLGGSWPQYV MLRMADLLTV SSCSTAPHLT CSADAQKKEC QALGGTCLYK RDGYYLTSIV 480
  481 GIFLAISICV SLITPVVRRL TKAPISSWHI HSKIAETYT

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..519] PSI-BLAST 27.154902 Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • transporter activity
    		•  4.09176719149278 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  3.5865018981083 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  3.3426261924492 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  3.29689809004391 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  1.94035843948137 bayes_pls_golite062009
  • active transmembrane transporter activity
    		•  1.59419818573076 bayes_pls_golite062009
  • cation transmembrane transporter activity
    		•  1.5181741634556 bayes_pls_golite062009
  • binding
    		•  1.3181781780038 bayes_pls_golite062009
  • secondary active transmembrane transporter activity
    		•  1.22264637452409 bayes_pls_golite062009
  • polyol transmembrane transporter activity
    		•  0.924836669821548 bayes_pls_golite062009
  • alcohol transmembrane transporter activity
    		•  0.924836669821548 bayes_pls_golite062009
  • glycerol transmembrane transporter activity
    		•  0.812001619402678 bayes_pls_golite062009
  • symporter activity
    		•  0.74591237387473 bayes_pls_golite062009
  • solute:cation symporter activity
    		•  0.74591237387473 bayes_pls_golite062009
  • sugar:hydrogen symporter activity
    		•  0.143419068761182 bayes_pls_golite062009
  • cation:sugar symporter activity
    		•  0.143419068761182 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
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