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Protein Overview: SPCC1393.02c

General Information:
Name(s) found: SPCC1393.02c [Sanger Pombe]
Description(s) found:
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  • pir||T40950 hypothetical protein SPCC1393.02c - fission yeast (Schizosaccharomyces pombe) [NCBI NR]
  • gi|74582989|sp|O94714.1|SPT2_SCHPO RecName: Full=Protein spt2 [NCBI NR]
  • gi|4468721|emb|CAB38158.1| non-specific DNA binding protein Spt2 (predicted) [Schizosaccharomyces pombe] [NCBI NR]
  • gi|19075460|ref|NP_587960.1| non-specific DNA binding protein Spt2 (predicted) [Schizosaccharomyces pombe] [NCBI NR]
  • non-specific DNA binding protein Spt2 [Sanger Pombe]
  • Protein spt2 OS=Schizosaccharomyces pombe GN=spt2 PE=2 SV=1 [Swiss-Prot]
  • HYPOTHETICAL PROTEIN; SEQUENCE ORPHAN; PUTATIVE COILED-COIL REGIONS: O94714; [pompepVF.fasta]
  • Hypothetical protein [pompep4896]
  • |||hypothetical protein [pompepnew.fasta]
  • SPCC1393.02c protein [4896.FASTAC]
  • |||hypothetical protein|Schizosaccharomyces pombe|chr 3|||Manual [pombe041504.fasta]
  • hypothetical protein [Schizosaccharomyces pombe]gi|4468721|emb|CAB38158.1| SPCC1393.02c [Schizosaccharomyces pombe]gi|7491795|pir||T40950 hypothetical protein SPCC1393.02c - fission yeast (Schizosaccharomyces pombe) [nrdb_11152004_Chlamydomonas]
  • (O94714) Hypothetical protein [pompep4896_normal_reversed]
  • |spt2||non-specific DNA binding protein Spt2 |Schizosaccharomyces pombe|chr 3|||Manual [SGD_S-Pombe_na_10-23-2009_con_reversed.fasta]
  • hypothetical protein SPCC1393.02c [Schizosaccharomyces pombe 972h-] [nr-271106-contam.fasta]
  • SPCC1393.02c [Schizosaccharomyces pombe] [nr-271106-contam.fasta]
  • |||non-specific DNA binding protein Spt2 |Schizosaccharomyces pombe|chr 3|||Manual [spombe-190209-contam.fasta]
  • Protein spt2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=spt2 PE=3 SV=1 [uniprot_sprot.fasta.20160308]
    • Organism: Schizosaccharomyces pombe
    Length: 406 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article][ISSLink to PubMed article]
    spindle [IDALink to PubMed article]
    nucleolus [IDALink to PubMed article]
    nuclear heterochromatin [ISSLink to PubMed article]
    Biological Process: negative regulation of transcription from RNA polymerase II promoter [ISSLink to PubMed article]
    chromatin remodeling [NASLink to PubMed article]
    Molecular Function: DNA binding [ISSLink to PubMed article]
    transcription regulator activity [NASLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGTPSFQKL MALADSQSAQ AAVQIEQLRK AQIREKAREI TEERNRQRKL QRERELRQKY  60
   61 EEEQRRQQAM EAKRIAASTR QTSERPPLSA EEAKRIREVK EKDRLESKKN ERQGKPRSYN 120
  121 ELLRQASSAP AVNETSSSGL LQSKDKRSQS PHSPKKPVKN SSSRDQPVRN SGATSTASLP 180
  181 PAGLRAGRGS QISASLAWLK TGGASAAPSN PRQPPPTSNF SNRKARYASN GLVQLQTGPK 240
  241 RDKRSAGEVQ DEIMKRRQNS SISQAATPRT VSNSETSYVG SPALKQSKPN SLKSNNTSRK 300
  301 TSASSAITKP KARPHTSRHD EFVVSDDDEL NDRVPDVSSE IWKIFGKRKQ DYVSRDVFSD 360
  361 EDDMEATGHD VWREEQAAAR AARLEDELEE QRERERELAK KRRKNK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..406] PSI-BLAST 13.522879 Heavy meromyosin subfragment


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle