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Protein Overview: prp18

General Information:
Name(s) found: prp18 / SPCC126.14 [Sanger Pombe]
Description(s) found:
Found 22 descriptions.
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  • U5 snRNP-associated protein Prp18 [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 343 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    spliceosomal complex [ISSLink to PubMed article]
    Biological Process: nuclear mRNA splicing, via spliceosome [ISSLink to PubMed article]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDFLKEEIER KRRQLEGTSE LPVKKAFRRG DWEKEREKKY LQEKQQKDEQ RELKKRKLEE  60
   61 ERLKYEEKKL RISRLANKES SRNEELLTET TTPSPAVKAS PASTKLSVSE NDRLSIPEIT 120
  121 KDNLTLTEII AKLREMKEPI RLFGESEEAT IQRYYSLLKY KKLEEIENEL LTKGVETIDF 180
  181 EHATTTKPKV SKQVVAFLQH GIRIWDNFLS SKSINSFESS ESQMQLKIFR QAKQDLDVLI 240
  241 QLIVDEALND DIFKSIAEIC YRCQKHEFVK ANDMYLRLTI GNAPWPIGVT MVGIHERSAH 300
  301 QRLQANPSSN ILKDEKKRKC LQALKRFITF QERESSNLPE YTD

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..255] PSI-BLAST 6.39794 Heavy meromyosin subfragment
    2 View Details [256..343] PSI-BLAST 43.0 Functional domain of the splicing factor Prp18


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle