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Protein Overview: SPBP8B7.17c

General Information:
Name(s) found: SPBP8B7.17c [Sanger Pombe]
Description(s) found:
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  • pir||T40811 probable thiamin biosynthesis protein - fission yeast (Schizosaccharomyces pombe) [NCBI NR]
  • gi|74582832|sp|O94265.1|THI21_SCHPO RecName: Full=Putative phosphomethylpyrimidine kinase 1 [NCBI NR]
  • gi|3810841|emb|CAA21802.1| phosphomethylpyrimidine kinase (predicted) [Schizosaccharomyces pombe] [NCBI NR]
  • gi|19113316|ref|NP_596524.1| phosphomethylpyrimidine kinase [Schizosaccharomyces pombe 972h-] [NCBI NR]
  • phosphomethylpyrimidine kinase [Sanger Pombe]
  • Putative hydroxymethylpyrimidine/phosphomethylpyrimidine kinase 1 OS=Schizosaccharomyces pombe GN=SPBP8B7.17c PE=2 SV=1 [Swiss-Prot]
  • PUTATIVE THIAMINE BIOSYNTHESIS PROTEIN: O94265; [pompepVF.fasta]
  • Putative thiamine biosynthesis protein [pompep4896]
  • |||TENA/THI domain [pompepnew.fasta]
  • SPBP8B7.17c protein [4896.FASTAC]
  • |||TENA/THI domain|Schizosaccharomyces pombe|chr 2|||Manual [pombe041504.fasta]
  • putative thiamine biosynthesis protein [Schizosaccharomyces pombe]gi|3810841|emb|CAA21802.1| SPBP8B7.17c [Schizosaccharomyces pombe]gi|7493026|pir||T40811 probable thiamin biosynthesis protein - fission yeast (Schizosaccharomyces pombe) [nrdb_11152004_Chlamydomonas]
  • (O94265) Putative thiamine biosynthesis protein [pompep4896_normal_reversed]
  • |||TENA/THI family protein|Schizosaccharomyces pombe|chr 2|||Manual [SGD_S-Pombe_na_10-23-2009_con_reversed.fasta]
  • SPBP8B7.17c [Schizosaccharomyces pombe] [nr-271106-contam.fasta]
  • hypothetical protein SPBP8B7.17c [Schizosaccharomyces pombe 972h-] [nr-271106-contam.fasta]
  • |||phosphomethylpyrimidine kinase |Schizosaccharomyces pombe|chr 2|||Manual [spombe-190209-contam.fasta]
  • Putative hydroxymethylpyrimidine/phosphomethylpyrimidine kinase 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBP8B7.17c PE=3 SV=1 [uniprot_sprot.fasta.20160308]
    • Organism: Schizosaccharomyces pombe
    Length: 506 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    cytoplasm [IDALink to PubMed article]
    cytosol [IDALink to PubMed article]
    Biological Process: phosphorylation [ICLink to PubMed article]
    thiamin biosynthetic process [IEA]
    Molecular Function: ATP binding [IEA]
    phosphomethylpyrimidine kinase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MISTCITVAG SDCSGGAGVQ ADLKVFTAHS VYGMSAVTAI TSQNTIGVNG VHLIPASYVE  60
   61 QQISACLLDV HCEVMKTGML FNQQILKVIV ESIDRFKIKK VVVDPLIATR KGALLVMPDY 120
  121 LELFVKELIP RAEVLIPNIA EALIILKHMT NEFVEIHHLE DVKAVGKKLI KAGCKNVVIR 180
  181 CDDIPFASDF FCSRETNMPP TWYLYVLCTS EGEVLLPQKW LASKTARGTS CALSSAVASN 240
  241 LAIGLDLVTA TQNAVSYTQR ALEMSFHLGR GANSLDYASA LTRLPYEKGE FINFVRYHPS 300
  301 ITPKWLSIVN HPFVEQLKAG TLSRLPFQKY LVLKYHMLIN NAQAAGMMAF SSSSISAIEH 360
  361 SAKIIQAIKE ENVTHLRICE QYGLSASQIT KSKPEIVKSH SLFIHDTAQQ DGLRGIQIAM 420
  421 LPFVFMIQEV VSQISASDGY PYVAWVEHCK DKSATSHIET LLESLETNSQ IISLSKVQHL 480
  481 LGILEKSLDF ERLVLDTSSS NESSVF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..283] PSI-BLAST 57.154902 4-amino-5-hydroxymethyl-2-methylpyrimidine phosphate kinase (HMP-phosphate kinase, ThiD)
    2 View Details [284..506] PSI-BLAST 54.0 Structure of TenA from Bacillus subtilis

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • phosphomethylpyrimidine kinase activity
    		•  3.972577109569 bayes_pls_golite062009
  • carbohydrate kinase activity
    		•  2.34445983129813 bayes_pls_golite062009
  • thiaminase activity
    		•  2.33383885490808 bayes_pls_golite062009
  • phosphotransferase activity, phosphate group as acceptor
    		•  2.29466565429735 bayes_pls_golite062009
  • kinase activity
    		•  2.28531824242987 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
    		•  2.27980720248925 bayes_pls_golite062009
  • transferase activity
    		•  2.15883296431019 bayes_pls_golite062009
  • catalytic activity
    		•  1.74474587246986 bayes_pls_golite062009
  • hydroxyethylthiazole kinase activity
    		•  1.28568044601242 bayes_pls_golite062009
  • thiamin-phosphate diphosphorylase activity
    		•  1.27602595951972 bayes_pls_golite062009
  • phosphotransferase activity, alcohol group as acceptor
    		•  0.673555832721854 bayes_pls_golite062009
  • phosphofructokinase activity
    		•  0.37205329607884 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.35385659578167 bayes_pls_golite062009
  • binding
    		•  0.2717506679077 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.219913271321955 bayes_pls_golite062009
  • pyridoxal kinase activity
    		•  0.217863391052366 bayes_pls_golite062009
  • DNA binding
    		•  0.101423482181266 bayes_pls_golite062009
    2
    Term Confidence Notes
  • binding
    		•  0.653486090379666 bayes_pls_golite062009
  • catalytic activity
    		•  0.476060647762462 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.37460460006397 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle