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Protein Overview: ubp10

General Information:
Name(s) found: ubp10 / SPBC577.07 [Sanger Pombe]
Description(s) found:
Found 19 descriptions.
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  • ubiquitin C-terminal hydrolase Ubp10 [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 502 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article][ISSLink to PubMed article]
    ribonucleoprotein complex [IEA]
    Biological Process: nuclear mRNA splicing, via spliceosome [ISSLink to PubMed article]
    ubiquitin-dependent protein catabolic process [IEA]
    Molecular Function: zinc ion binding [IEA]
    ubiquitin thiolesterase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSENKDKNNI LKRHIEEDNN IDNGKRKKLE LGKDMEDVHD IASKEMEEHE TTPIISQNLY  60
   61 LDTINRKLLD FDFEKVCSVS LTNLSVYACL VCGRYFQGRG PSSHAYFHAL TENHHVFVNC 120
  121 STLKFYVLPE SYQVESSALQ DIAYVMRPTF TKLEVQRLDH TPQLSYDLML KPYVPGFVGM 180
  181 NNIKNNDYFN VVIHMLAHVK PFRNYFLLKN FDNCPQLVQR LAILIRKLWN HKAFKSHVSP 240
  241 QELIQEVTVL SHKKYSINEQ KDPVEFLSWF LNTLHNCLGG KKSTIAKPTS IVHYSFQGFV 300
  301 RIESQKIRQH AEKGEQVVFT GDRVIQTNVV PFLYLTLDLP PKPIFQDEFE GNIIPQVELK 360
  361 EILNKYNGVH TQELAGMRRR FHLMTAPPYF IFHIKRFMKN NYFTERNQTI VTFPLDDFDM 420
  421 SPFIDDSFIQ SNPKISTKYN LVANIIHESV THAEEEFHNF RIQIRNPSTN KWYQIQDLYV 480
  481 EEISSDMIRL GESFIQLWER SS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..164] PSI-BLAST 15.0 No description for 2g43A was found.
    2 View Details [165..502] PSI-BLAST 66.69897 No description for 2ibiA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle