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Protein Overview: cbf11

General Information:
Name(s) found: cbf11 / SPCC736.08 [Sanger Pombe]
Description(s) found:
Found 18 descriptions.
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  • CBF1/Su(H)/LAG-1 family transcription factor [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 613 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed articleLink to PubMed article]
    cytosol [IDALink to PubMed article]
    Biological Process: regulation of barrier septum formation [IMPLink to PubMed article]
    regulation of nuclear division [IMPLink to PubMed article]
    negative regulation of cell-substrate adhesion [IMPLink to PubMed article]
    negative regulation of cell-cell adhesion [IMPLink to PubMed article]
    regulation of cell separation during cytokinesis [IMPLink to PubMed article]
    positive regulation of transcription from RNA polymerase II promoter [IDALink to PubMed article]
    gene-specific transcription from RNA polymerase II promoter [RCALink to PubMed article]
    Molecular Function: transcription factor activity [IDALink to PubMed article]
    specific RNA polymerase II transcription factor activity [RCALink to PubMed article]
    sequence-specific DNA binding [IDALink to PubMed article]
    transcription activator activity [IMPLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGDYFAWDFA NISGSNTSGS LNLNQLNLDN INNGLHNQED GAGGRNENSE RVGSGSPGSV  60
   61 SMQVLSLFSA VNSALATLEK SEEFPSVVKD EQSIFPAVAK ASNSLDELAQ NIIPAPSPPG 120
  121 FNRKRKTFDE DSSVEMIRRA ISDHLDLLNN CCIGIANLNE DSVHKISLTR SGKPSQLVTV 180
  181 SCRHSSVIQK SYGSEKRYLC PPPMVYINGN YSSIFNQSFR TEISIMNDFG QCSQPISEEY 240
  241 TGQGCMIFRS LHISSLVAAK SKNLRLSLDM FSNVNNQLLS HLVTSSISIV SKPSKKGSKL 300
  301 KISNITLRSG SVVSLYNRIN SQTVRTKYTS IEAGQFCLRG DRWVPLRINL LLPDENGKLK 360
  361 VCDDVDNPEP IKYGSIVELV DEATGTTSDP LIIRRVEKDH IAEEDGYVNQ MHRIVLESAY 420
  421 PISNVRHLKI AEHSSLAYSN NISVRWFLGA TSAQNRNASS EAILPIEWEA VGNLSSNEMT 480
  481 RVGDSVCWTI VGISHFDCTM MLPFNQNPVP TVTDYPYIEE PPEYLESSRS LQFKIGGYSV 540
  541 GLQIWLGVHG PLSYSFTAAA DTSTMGTVTL GLSQISYDPS CAEQKYPLLF VIPGGIVIIG 600
  601 KCEILLTSSA FGN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..83] MSA 1.005981 View MSA. No confident structure predictions are available.
    2 View Details [84..170] deduced N/A No confident structure predictions are available.
    3 View Details [171..613] PSI-BLAST 166.0 No description for 2f8xC was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.74

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle