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Protein Overview: kap1

General Information:
Name(s) found: kap1 / SPBC28F2.10c [Sanger Pombe]
Description(s) found:
Found 22 descriptions.
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  • chromatin remodeling complex subunit Ngg1 [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 551 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    nuclear chromatin [IC]
    chromatin remodeling complex [RCALink to PubMed article]
    SAGA complex [ISSLink to PubMed article]
    Biological Process: chromatin remodeling [ISSLink to PubMed article]
    transcription from RNA polymerase II promoter [ICLink to PubMed article]
    histone acetylation [ISSLink to PubMed article]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSEQQNEAD SKPAVIPQCF KIENQYETFS RLSETSTPGV VPSVSTLWRL LFELQKMIEC  60
   61 EPSCVEYFRQ RKEELESHVD SEIETSKDES SVNKVEEKVE EFKEDNVEQE IKQKRSLSES 120
  121 PQESMLEKVS KKPKVSEAHN EEISPENVET IENELDLPVK GKDEQTTGLV YKNANDLLTG 180
  181 SLLSFIVDDS FSYEQKKKLL CVDSFPTSDV RSLVAGTPAT DDFSHNKPNN QISISTFYSS 240
  241 LDPYFRAFND DDIAFLKKGF DVSSSYNIPP LGERYYDLTP EDEMTNLCAN SIYQNLQTSA 300
  301 QGSLEAFNEA DTVSEEVRCG PLTERLMASL IPCYTQNDEE QKPSIAVGEF AETDSGSEKS 360
  361 KIGTSIDGIE SGNNEYTEQP DIQESSLSIC EDRLRYTLKQ LGILYDGDVD WSKRQDDEIS 420
  421 ATLRSLNARL KVVSDENEKM RNALLQMLPE EMAFQEFQNV MDDLDKQIEQ AYVKRNRSLK 480
  481 VKKKRIVTDK IGSSATSGSF PVIKSLMDKR SMWLEKLQPL FQDKLTQHLG SPTSIFNDLS 540
  541 DHTTSNYSTS V

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..223] PSI-BLAST 37.0 Heavy meromyosin subfragment
    2 View Details [224..362] MSA 1.043976 View MSA. No confident structure predictions are available.
    3 View Details [363..551] MSA 2.032984 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle