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Protein Overview: SPAC1399.02

General Information:
Name(s) found: SPAC1399.02 [Sanger Pombe]
Description(s) found:
Found 17 descriptions.
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  • membrane transporter [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 589 amino acids

    Gene Ontology:
    Cellular Component: integral to plasma membrane [ISSLink to PubMed article]
    Biological Process: transmembrane transport [ISSLink to PubMed article]
    drug export [IC]
    tetracycline transport [IEA]
    response to antibiotic [IEA]
    Molecular Function: tetracycline:hydrogen antiporter activity [IEA]
    transmembrane transporter activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNPSTSPNRN LASPKSLQLY TTGSEVAWYP TALDEANEIK SINSKAFSFK NQDQIYGAGS  60
   61 LKSRFSTHEI SSEKNDSPDF TLVLPSNRLY IVIPGLMLSI FLAALDQTVI TTAIPTIVAN 120
  121 LDGGSSYSWI GTAYSLAETS ILPFCGIMSE VVGRKIVLYT SIVLFLFGSA MCGAAQNMLW 180
  181 LVLCRAVQGI GGGGIMSLVT IVIADITPLQ TRPYYTGCMG VTWGVASVMG PLIGGAISQN 240
  241 TTWRWIFFIN LPTGGLSLAL LIFFLNLVPK PTVSFCVFLR DFDFVGIVTI TTGVVLFLLG 300
  301 LNIGSTTGHW AHANVLCYLI FGILCIAGFV VNELYTTRTR IIAPSAFQTL SLSSVMVTSF 360
  361 LHYYIMSTVT YYIPIYFQSI KGDGPLMSGV HTLSLAVVSS VVSAISGMGI GKLKNYRYPM 420
  421 IGGWIVLLAG TGSMIAIYYD TPIPRTMGFL ALTAVGIGNL FQPNLIAIQA SVPPALMATS 480
  481 CSAFMLLRNM GASVGISIGA VIYDQQLTTL LKGTEYSTGL SYSQIASIPS VSERNFVFNV 540
  541 YANAIRTIWI VNCPVAGVGM LLSFFTKQEK LSQSVTEYKE KDKGFKDAP

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..589] PSI-BLAST 28.522879 Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • transporter activity
    		•  4.09176719149278 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  3.59744164024479 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  3.5865018981083 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  3.54194478414824 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  2.21266150105753 bayes_pls_golite062009
  • cation transmembrane transporter activity
    		•  1.79369588808394 bayes_pls_golite062009
  • active transmembrane transporter activity
    		•  1.59419818573076 bayes_pls_golite062009
  • secondary active transmembrane transporter activity
    		•  1.22264637452409 bayes_pls_golite062009
  • binding
    		•  1.01584233411372 bayes_pls_golite062009
  • polyol transmembrane transporter activity
    		•  0.924836669821548 bayes_pls_golite062009
  • alcohol transmembrane transporter activity
    		•  0.924836669821548 bayes_pls_golite062009
  • glycerol transmembrane transporter activity
    		•  0.812001619402678 bayes_pls_golite062009
  • symporter activity
    		•  0.74591237387473 bayes_pls_golite062009
  • solute:cation symporter activity
    		•  0.74591237387473 bayes_pls_golite062009
  • sugar:hydrogen symporter activity
    		•  0.143419068761182 bayes_pls_golite062009
  • cation:sugar symporter activity
    		•  0.143419068761182 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle