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Protein Overview: SPCC162.06c

General Information:
Name(s) found: SPCC162.06c [Sanger Pombe]
Description(s) found:
Found 20 descriptions.
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  • vacuolar sorting protein Vps60 [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 210 amino acids

    Gene Ontology:
    Cellular Component: fungal-type vacuole membrane [ISSLink to PubMed article]
    Biological Process: ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway [ICLink to PubMed article]
    late endosome to vacuole transport [ISSLink to PubMed article]
    intracellular protein transport [IC]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHRLFGRKPP TQPTASLTDA IDSLDKRSDS VEVKIAKLDA QLSVFQQKIA NTRPGPGQTA  60
   61 LKQRAMNVLR QKKIYESQLQ QLQQQSFNME QAAMTTESLK NTMATVQTMQ ETARQLKSQS 120
  121 KNVSIEKIEK LQDEIQDYMD AAGELNEVLG QNMTDINVDE EELDAELEAL QQESSWLGDQ 180
  181 STAEKPSYLM PSNELPNFVD EEVAEPSTAQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..210] PSI-BLAST 17.0 No description for 2gd5A was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle