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Protein Overview: SPCC4G3.16

General Information:
Name(s) found: SPCC4G3.16 [Sanger Pombe]
Description(s) found:
Found 19 descriptions.
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  • CMP/dCMP deaminase family [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 405 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article][ISSLink to PubMed article]
    cytoplasm [ISSLink to PubMed article]
    mitochondrion [ISSLink to PubMed article]
    cytosol [IDALink to PubMed article]
    Biological Process: tRNA pseudouridine synthesis [ISSLink to PubMed article]
    riboflavin biosynthetic process [IEA]
    Molecular Function: zinc ion binding [IEA]
    5-amino-6-(5-phosphoribosylamino)uracil reductase activity [IEA]
    diaminohydroxyphosphoribosylaminopyrimidine deaminase activity [IEA]
    pseudouridine synthase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQIPEKYLSS VDNVEEETQI LFALSKQKDA DLGMLDSKQE QIALTIGNKP IKVKQSLQSL  60
   61 HQSRGSTGSV LWKTSVKVVP WLLQQSWFMN SLTPKTSILE LGSGISGLAG ILLSPFVGNY 120
  121 VASDKQLYLK KIRENLDQNN ASDVEVHELD WKSTPYPKDW TFDFLDYVLF FDCIYNPHLN 180
  181 AHLVSCLASL AERYPGMQCL FAQELRDQET LVDFLERVRP YFEVDLIKME EINKTSVASS 240
  241 TNLPPANMSL FIMKPYNHEE YMLKALNEAK KCEPTDSAFC VGAVIVQNGK IVSTGYSRER 300
  301 PGNTHAEECA IEKFMLKNPT DSLEGAIMYS TMEPCSKRLS KKVSCTDLIV KQKFSTVVLG 360
  361 SLEPDIFVKC EGVDLLKKAG IVVIEKLTFQ DDCLREAVRG HPPKH

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..277] PSI-BLAST 13.09691 No description for 2fytA was found.
    2 View Details [278..405] PSI-BLAST 28.69897 Crystal structure of a bifunctional deaminase and reductase involved in riboflavin biosynthesis


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.69

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle