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Protein Overview: SPAP27G11.04c

General Information:
Name(s) found: SPAP27G11.04c [Sanger Pombe]
Description(s) found:
Found 18 descriptions.
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  • tRNA specific adenosine deaminase subunit Tad3 [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 315 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article][ISSLink to PubMed article]
    cytoplasm [ISSLink to PubMed article]
    cytosol [IDALink to PubMed article]
    Biological Process: tRNA modification [ISSLink to PubMed article]
    Molecular Function: zinc ion binding [IEA]
    protein heterodimerization activity [NASLink to PubMed article]
    tRNA-specific adenosine deaminase activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVKTNISKNS PKEATVPELD WPFKLIKSHL ETRKLETENV WIACFEPKYA SKVTQYVKQI  60
   61 RSKQKESLLH CNRLRRIQDE NGSLELQIII CPEKSMTANE IGKDFEDLGI VSKMIFLYAV 120
  121 PAFPPLTDEQ FHEWNSVWPV SYRKHVQRQD VFTVHELKRI ESILEDLINA AGASHKHGEI 180
  181 GCAAAIYDPT TDTVLAVSVD ERSKLKNPIN HCVMNAINLV AKRELSRRQN RTDGSKDRYL 240
  241 CKDLTVVMTH EPCVMCSMGL LHSRIRRLIY CKKQPLTGGI ESLYGIHWRA ELNHRYLAYS 300
  301 GWNKPVPSIK ENIHV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..151] MSA 1.101991 View MSA. No confident structure predictions are available.
    2 View Details [152..315] PSI-BLAST 43.221849 Crystal structure of tRNA adenosine deaminase TadA from Escherichia coli

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • catalytic activity
    		•  1.70756445127105 bayes_pls_golite062009
  • binding
    		•  1.64474382695496 bayes_pls_golite062009
  • methyltransferase activity
    		•  1.24697538679504 bayes_pls_golite062009
  • transferase activity, transferring one-carbon groups
    		•  1.16679252289538 bayes_pls_golite062009
  • transferase activity
    		•  0.771056210634777 bayes_pls_golite062009
  • hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines
    		•  0.113989053833271 bayes_pls_golite062009
  • protein binding
    		•  0.072557222523031 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle