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Protein Overview: SPAC17A2.05

General Information:
Name(s) found: SPAC17A2.05 [Sanger Pombe]
Description(s) found:
Found 19 descriptions.
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  • fumerate reductase [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 513 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    cytoplasm [ISSLink to PubMed article]
    mitochondrion [IDALink to PubMed article][ISSLink to PubMed article]
    cytosol [IDALink to PubMed article]
    Biological Process: tricarboxylic acid cycle [IC]
    fumarate metabolic process [ISSLink to PubMed article]
    Molecular Function: electron carrier activity [IEA]
    fumarate reductase (NADH) activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRCLTIYTWT FRRLPFIPST NSASFFSTLR FNMSTANNTQ AIVIGGGLAG LSATNTILDL  60
   61 GGNVLLLDKN TAFGGNSVKA ASGINAAPTQ LQFDQHVSDS VNTFYNDSIL SAKSKAKPEL 120
  121 LRTLTSKSSS AVDWLSERFG LQMDQLSRLA GHSEPRTHRG THPDYPFKPL AFVLVDQTEK 180
  181 FAASHPDRLQ IKKNARVTRL LTNPNHDKVF GVEYMDLSDK SNHTVYGPVV LATGGYAADY 240
  241 SDDSLLKLYH PEALSLSTTN GPYCTGDGHK MVMSIGGSTV DLDLVQIHPT GFVDPKDPTA 300
  301 LTKFLAAEAL RGSGAVLLTS QGRRFCDELG YRDYVTGEMM KLKSPVYLVL NSAAAEEVAN 360
  361 FIKFYSFKGL MKKMKAEELC STLNCTKDEL ASTFSEYNRA AKGEIPDEFG RKYFGKTPLE 420
  421 LTDTFTVGEV VPVLHYTMGG VQVDTQSRVL STNGNVIDGL FAAGEIVGGI HGENRLGGSS 480
  481 LLACVVFGRL AGQGASSTML RRFIASSTST ASS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..513] PSI-BLAST 72.69897 Flavocytochrome c3 (respiratory fumarate reductase), N-terminal domain; Flavocytochrome c3 (respiratory fumarate reductase)

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • L-aspartate oxidase activity
    		•  7.97437641217089 bayes_pls_golite062009
  • aspartate oxidase activity
    		•  7.32727957948448 bayes_pls_golite062009
  • oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor
    		•  5.00880700655468 bayes_pls_golite062009
  • succinate dehydrogenase activity
    		•  4.85506290418994 bayes_pls_golite062009
  • succinate dehydrogenase (ubiquinone) activity
    		•  3.70791057697947 bayes_pls_golite062009
  • oxidoreductase activity, acting on the CH-CH group of donors, quinone or related compound as acceptor
    		•  3.70791057697947 bayes_pls_golite062009
  • oxidoreductase activity
    		•  3.25470541847124 bayes_pls_golite062009
  • electron carrier activity
    		•  2.8553929424231 bayes_pls_golite062009
  • oxidoreductase activity, acting on NADH or NADPH
    		•  2.84060092432585 bayes_pls_golite062009
  • oxidoreductase activity, acting on the CH-CH group of donors
    		•  2.78793325009909 bayes_pls_golite062009
  • oxidoreductase activity, acting on sulfur group of donors, NAD or NADP as acceptor
    		•  2.26549080531565 bayes_pls_golite062009
  • oxidoreductase activity, acting on sulfur group of donors
    		•  2.11247286526577 bayes_pls_golite062009
  • dihydrolipoyl dehydrogenase activity
    		•  1.91979117253135 bayes_pls_golite062009
  • catalytic activity
    		•  1.75556359035561 bayes_pls_golite062009
  • binding
    		•  1.41440014472974 bayes_pls_golite062009
  • oxidoreductase activity, acting on the CH-NH2 group of donors
    		•  0.798505263716232 bayes_pls_golite062009
  • oxygen-dependent protoporphyrinogen oxidase activity
    		•  0.71497408952162 bayes_pls_golite062009
  • fumarate reductase (NADH) activity
    		•  0.65260793370113 bayes_pls_golite062009
  • succinate-CoA ligase activity
    		•  0.468246082354334 bayes_pls_golite062009
  • coenzyme binding
    		•  0.44036421821989 bayes_pls_golite062009
  • protein binding
    		•  0.159209309982354 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.65

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle