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Protein Overview: SPBC3B8.05

General Information:
Name(s) found: SPBC3B8.05 [Sanger Pombe]
Description(s) found:
Found 20 descriptions.
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  • diphthamide biosynthesis protein [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 436 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    cytoplasm [ISSLink to PubMed article]
    cytosol [IDALink to PubMed article]
    Biological Process: regulation of translation [IC]
    peptidyl-diphthamide biosynthetic process from peptidyl-histidine [ISSLink to PubMed article]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAEVKKSIPK RRFVGKKNRK ENNLDGSNRD VENAALVTIN SKRSAGRVAT QIPEDILNDK  60
   61 AINEAIKLLP QNYNFEIHKT IWHIRLRKAK RVALQLPEGL LMFGCILSDI FEQFCQVETI 120
  121 VMGDVTYGAC CIDDFTARAL DCDFLVHYGH SCLIPVDQTP IKVLYVFVDI KIDLQHVVSS 180
  181 LKHNLPSNSR LALVGTIQFV GSLNSIKDAL QIQDEDGKGG FYVVIPQAKP LSPGEALGCT 240
  241 SPYIEKGSVD ALIYIGDGRF HLESVMIANP DLPAYRYDPY SHKLSIESYA HEEMKSIRYS 300
  301 AVEKARTAKK FGLIQGTLGR QGSPKVLENL KNTLRKNNKD FVCVLMSEIF PSRLGQFSDI 360
  361 DAWIQVACPR LSIDWGYAFP APLLTPYEAS AAFNVVPWKE VYPMDFYATN SLGNWTPNNP 420
  421 ENRPLPNRKK TGPVSS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..74] MSA 1.090991 View MSA. No confident structure predictions are available.
    2 View Details [75..249] MSA 3.09897 View MSA. No confident structure predictions are available.
    3 View Details [250..436] MSA 8.104995 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.82

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle