YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: SPCC126.12

General Information:
Name(s) found: SPCC126.12 [Sanger Pombe]
Description(s) found:
Found 21 descriptions.
SHOW ALL
  • NGG1p interacting factor 3 family [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 278 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    cytoplasm [ISSLink to PubMed article]
    mitochondrion [ISSLink to PubMed article]
    cytosol [IDALink to PubMed article]
    Biological Process: transcription [ISSLink to PubMed article]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKANISSKL KKVVESIYNP KLADSWDNTG LLLEAPFPRT NASSVLLTID LTEKVAEEAI  60
   61 SNKLVSSIVA YHPIIFRGLK AITMEDPQQR SLLKLAAEGI HVYSPHTAVD AAVDGVNDWL 120
  121 AQGIAGGRNN IKSVVPTQQN SVMAEAEGYG RICELKIPTT LRELVQRAKE LTGLQYVQVC 180
  181 APNGLDSHIS KVSLCAGSGG SVVMNTDADL YFTGELSHHQ VLAAMAKGIS VILCGHSNTE 240
  241 RGYLKDVMCQ KLASSFHKEG VDANVIVSSM DADPLTTM

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..278] PSI-BLAST 65.39794 No description for 2fywA was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  2.36275821588531 bayes_pls_golite062009
  • transcription factor binding
    		•  0.8197800099048 bayes_pls_golite062009
  • protein binding
    		•  0.188326419539465 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle