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Protein Overview: ini1

General Information:
Name(s) found: ini1 / SPAC23H3.02c [Sanger Pombe]
Description(s) found:
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  • gi|7490984|pir||T38295 hypothetical protein SPAC23H3.02c - fission yeast (Schizosaccharomyces pombe) [NCBI NR]
  • gi|6073754|emb|CAB40798.2| RING finger-like protein Ini1 [Schizosaccharomyces pombe] [NCBI NR]
  • gi|30409079|gb|AAP30040.1| transcription-splicing co-factor Ini1 [Schizosaccharomyces pombe] [NCBI NR]
  • gi|19114704|ref|NP_593792.1| RING finger-like protein Ini1 [Schizosaccharomyces pombe] [NCBI NR]
  • gi|10720336|sp|Q9UTB8.1|INI1_SCHPO RecName: Full=Pre-mRNA-splicing factor ini1 [NCBI NR]
  • RING finger-like protein Ini1 [Sanger Pombe]
  • Pre-mRNA-splicing factor ini1 OS=Schizosaccharomyces pombe GN=ini1 PE=2 SV=1 [Swiss-Prot]
  • VERY HIGHLY CONSERVED PROTEIN; SIMILAR TO S. CEREVISIAE YPR094W NULL LETHAL; PFAM-B_33273 DOMAIN: O13943;Q9UTB8; [pompepVF.fasta]
  • VERY HIGHLY CONSERVED PROTEIN; SIMILAR TO S. CEREVISIAE YPR094W WHICH IS NULL LETHAL; PFAM-B_33273 DOMAIN: O13943;Q9UTB8; [pompepV13]
  • Hypothetical UPF0123 protein C23H3.02c in chromosome I [pompep4896]
  • |||eukaryotic conserved protein [pompepnew.fasta]
  • Pre-mRNA splicing factor ini1 [4896.FASTAC]
  • |ini1||RING finger-like protein (PMID 14762117)|Schizosaccharomyces pombe|chr 1|||Manual [pombe041504.fasta]
  • hypothetical protein. [Schizosaccharomyces pombe]gi|6073754|emb|CAB40798.2| SPAC23H3.02c [Schizosaccharomyces pombe]gi|10720336|sp|Q9UTB8|INI1_SCHPO Pre-mRNA splicing factor ini1gi|30409079|gb|AAP30040.1| transcription-splicing co-factor Ini1 [Schizosa [nrdb_11152004_Chlamydomonas]
  • |ini1||RING finger-like protein |Schizosaccharomyces pombe|chr 1|||Manual [pompep2242005.fasta]
  • (Q9UTB8) Hypothetical UPF0123 protein C23H3.02c in chromosome I [pompep4896_normal_reversed]
  • |ini1||RING finger-like protein Ini1|Schizosaccharomyces pombe|chr 1|||Manual [SGD_S-Pombe_na_10-23-2009_con_reversed.fasta]
  • Pre-mRNA-splicing factor ini1 [nr-271106-contam.fasta]
  • SPAC23H3.02c [Schizosaccharomyces pombe] [nr-271106-contam.fasta]
  • transcription-splicing co-factor Ini1 [Schizosaccharomyces pombe] [nr-271106-contam.fasta]
  • transcription-splicing co-factor [Schizosaccharomyces pombe 972h-] [nr-271106-contam.fasta]
  • Pre-mRNA-splicing factor ini1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=ini1 PE=3 SV=1 [uniprot_sprot.fasta.20160308]
    • Organism: Schizosaccharomyces pombe
    Length: 117 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed articleLink to PubMed article]
    spliceosomal complex [ISSLink to PubMed article]
    cytosol [IDALink to PubMed article]
    Biological Process: nuclear mRNA splicing, via spliceosome [IDALink to PubMed article][IGILink to PubMed article]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKHHPDLVL CRRQPGITVG KLCERCDEKC PICDSHVRPT TLVRICDECA FGSSQDRCII  60
   61 CGAPGVSDCY YCSECTRMEY DRDGCPRVIN LGSSRTDWFY ERKKFKNAGK EMPGATY

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..117] Pfam 91.142668 No description for PF03660.5 was found. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle