General Information: |
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Name(s) found: |
SPAC6G9.14
[Sanger Pombe]
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Description(s) found:
Found 19 descriptions. SHOW ALL |
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Organism: | Schizosaccharomyces pombe |
Length: | 681 amino acids |
Gene Ontology: |
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Cellular Component: |
cytoplasm
[ISS]
cytosol [IDA] |
Biological Process: |
nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay
[ISS]
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Molecular Function: |
mRNA binding
[ISS]
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Sequence: |
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Sequence: [PDR BLAST] [ProtParam] |
1 11 21 31 41 51 | | | | | | 1 MTEQSSKSHP SFMSTEYSLP VFSSQYSDIE NKDVLKSNSW DPYAANAPIA LSEIPSSSKS 60 61 GKTNGSKAAV ESGLASGAFG NRTGNMNRNT SMSGYTFGSS NFVPYNLLSN TPSFTTSHSS 120 121 STTFVPPATM GGGLNNLSSP SSSLYLPGSA SYQRSNSKNS SASILQMNTT LDDIPILLRR 180 181 PGLSSYTPGP STSRRSISSS SNLGGNPGLI ANNPSASKNF AFTSGSSSTN NSTTSSSSMA 240 241 NGLQSISKHS AAFPLLSNAT SFFGENLTPS LAASTASTGS TDSSGSNIAN TLIAPTPTIS 300 301 PPSANTVGNP SPADTPGFNV PSLISDDPSV SSSLSSSVAS LSLQNSNILS FCKDQHGCRY 360 361 LQRLLEKKNQ SHIDAVFAET HPYLAVLMVD AFGNYLCQKL FEHASEAQRS TFIQIIAPKL 420 421 VPISFNMHGT RALQKIIDLV SSPDQISCIV NALRPNVVLL TKDLNGNHVI QKCLNKFSQE 480 481 DCQFIFDAIC EDPLDVSTHR HGCCVVQRCF DHASPAQIEQ LVEHIVPHAL TLVQDAFGNY 540 541 VLQYVLELNN PNHTEAIISY FLYKVRALST QKFSSNVMEK CIFFAPAAIK EKLISELMDE 600 601 KHLPKLLRDS FANYVIQTAL DNASVKQRAE LVERIKPLIP SIKNTPCGRR ILSKLERRHP 660 661 SSKEKPIVYS NSERVNTSSS A |
SHOWING SINGLE HITS. [ Hide Single Hits ]
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Domains predicted:
# | Region(s) | Method | Confidence | Match Description | |
1 | View Details | [1..116] | 3.416996 | View MSA. No confident structure predictions are available. | |
2 | View Details | [117..254] | 3.467997 | View MSA. No confident structure predictions are available. | |
3 | View Details | [255..335] | N/A | No confident structure predictions are available. | |
4 | View Details | [336..681] | 135.0 | Pumilio 1 |
Functions predicted (by domain):
# | Gene Ontology predictions | ||||||||||||||||||||||||
1 | No functions predicted. | ||||||||||||||||||||||||
2 | No functions predicted. | ||||||||||||||||||||||||
3 | No functions predicted. | ||||||||||||||||||||||||
4 |
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Protein predicted to be: | GLOBULAR (No transmembrane regions or signal peptide) |
Confidence of classification: | 0.96 |
Source: Reynolds et al. (2008)