| Protein: | SPAC6G9.14 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 681 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPAC6G9.14.
| Description | E-value | Query Range |
Subject Range |
|
|
483.0 | [0..3] | [673..212] |
|
|
481.0 | [0..15] | [658..366] |
|
|
480.0 | [0..34] | [658..381] |
|
|
479.0 | [0..37] | [669..239] |
|
|
478.0 | [0..324] | [658..2] |
|
|
478.0 | [0..70] | [658..545] |
|
|
477.0 | [0..15] | [658..486] |
|
Region A: Residues: [1-116] |
1 11 21 31 41 51
| | | | | |
1 MTEQSSKSHP SFMSTEYSLP VFSSQYSDIE NKDVLKSNSW DPYAANAPIA LSEIPSSSKS 60
61 GKTNGSKAAV ESGLASGAFG NRTGNMNRNT SMSGYTFGSS NFVPYNLLSN TPSFTT
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [117-254] |
1 11 21 31 41 51
| | | | | |
1 SHSSSTTFVP PATMGGGLNN LSSPSSSLYL PGSASYQRSN SKNSSASILQ MNTTLDDIPI 60
61 LLRRPGLSSY TPGPSTSRRS ISSSSNLGGN PGLIANNPSA SKNFAFTSGS SSTNNSTTSS 120
121 SSMANGLQSI SKHSAAFP
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [255-335] |
1 11 21 31 41 51
| | | | | |
1 LLSNATSFFG ENLTPSLAAS TASTGSTDSS GSNIANTLIA PTPTISPPSA NTVGNPSPAD 60
61 TPGFNVPSLI SDDPSVSSSL S
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [336-681] |
1 11 21 31 41 51
| | | | | |
1 SSVASLSLQN SNILSFCKDQ HGCRYLQRLL EKKNQSHIDA VFAETHPYLA VLMVDAFGNY 60
61 LCQKLFEHAS EAQRSTFIQI IAPKLVPISF NMHGTRALQK IIDLVSSPDQ ISCIVNALRP 120
121 NVVLLTKDLN GNHVIQKCLN KFSQEDCQFI FDAICEDPLD VSTHRHGCCV VQRCFDHASP 180
181 AQIEQLVEHI VPHALTLVQD AFGNYVLQYV LELNNPNHTE AIISYFLYKV RALSTQKFSS 240
241 NVMEKCIFFA PAAIKEKLIS ELMDEKHLPK LLRDSFANYV IQTALDNASV KQRAELVERI 300
301 KPLIPSIKNT PCGRRILSKL ERRHPSSKEK PIVYSNSERV NTSSSA
|
| Detection Method: | |
| Confidence: | 135.0 |
| Match: | 1ib2A |
| Description: | Pumilio 1 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| RNA binding | 2.11573661150436 | bayes_pls_golite062009 |
| binding | 1.83406697369076 | bayes_pls_golite062009 |
| protein binding | 1.04044934052933 | bayes_pls_golite062009 |
| nucleic acid binding | 0.967597910409065 | bayes_pls_golite062009 |
| mRNA binding | 0.73831124805124 | bayes_pls_golite062009 |
| hydrolase activity | 0.0579816100130538 | bayes_pls_golite062009 |
| transcription regulator activity | 0.022274123463527 | bayes_pls_golite062009 |
