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Protein Overview: gdi1

General Information:
Name(s) found: gdi1 / SPAC22H10.12c [Sanger Pombe]
Description(s) found:
Found 18 descriptions.
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  • GDP dissociation inhibitor Gdi1 [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 440 amino acids

    Gene Ontology:
    Cellular Component: cell division site [IDALink to PubMed article]
    cytoplasm [IDALink to PubMed article]
    cytosol [IDALink to PubMed article]
    Biological Process: vesicle-mediated transport [ISSLink to PubMed article]
    small GTPase mediated signal transduction [IC]
    regulation of GTPase activity [IEA]
    cellular response to stress [IEPLink to PubMed article]
    intracellular protein transport [IC]
    Molecular Function: Rab GDP-dissociation inhibitor activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDEEYDVIVL GTGLTECVLS GLLSVDGKKV LHIDRNDYYG ADSASLNLTQ LYALFRPGEQ  60
   61 RPESLGRDRD WCVDLVPKFL MANGDLTNIL IYTDVTRYIE FKQIAGSYVY RDGRIAKVPG 120
  121 NEMEALKSPL MSLFEKRRAK KFLEWVNNYR EDDPSTYKDI NIDRDSMESV FKKFGLQSGT 180
  181 QDFIGHAMAL YLDDAYLKKP ARETRERILL YASSIAKFGK SPYIYPLYGL GELPQGFARL 240
  241 SAIYGGTYML NQPVDEIVYG DDGVAIGVRS GDQVAKAKQI IGDPSYFREK VRSVGRLVRA 300
  301 ICILNHPIPN TDNLDSVQII IPQNQVKRKH DIYIAGISSV HNVCPKGYYL AIISTIVETA 360
  361 NPLSEIAPGL KLLGPVVESF SRVQEIYEPV TDGTKDQCYI SKSVDATSHF ETLTCDVRDI 420
  421 YKRMTGTDLV LKQRPKMEDQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..440] PSI-BLAST 122.0 Structure of RabGDP-dissociation inhibitor in complex with prenylated YPT1 GTPase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • small GTPase regulator activity
    		•  1.82777033221452 bayes_pls_golite062009
  • GTPase regulator activity
    		•  1.69589677829425 bayes_pls_golite062009
  • nucleoside-triphosphatase regulator activity
    		•  1.67690582043816 bayes_pls_golite062009
  • binding
    		•  1.28745887296004 bayes_pls_golite062009
  • enzyme regulator activity
    		•  1.00883251592654 bayes_pls_golite062009
  • amine oxidase activity
    		•  0.93095855430028 bayes_pls_golite062009
  • GDP-dissociation inhibitor activity
    		•  0.387378304822822 bayes_pls_golite062009
  • protein binding
    		•  0.347133050347128 bayes_pls_golite062009
  • transporter activity
    		•  0.0442116448779152 bayes_pls_golite062009
  • antioxidant activity
    		•  0.0209903577090486 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.00424758775661527 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle