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Protein Overview: SPAC22H10.05c

General Information:
Name(s) found: SPAC22H10.05c [Sanger Pombe]
Description(s) found:
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  • pir||T38207 probable cleaveage/polyadenylation factor - fission yeast (Schizosaccharomyces pombe) [NCBI NR]
  • gi|19114653|ref|NP_593741.1| mRNA cleavage and polyadenylation specificity factor complex subunit (predicted) [Schizosaccharomyces pombe] [NCBI NR]
  • gi|1723461|sp|Q10299.1|CLP1H_SCHPO RecName: Full=Protein clp1 [NCBI NR]
  • gi|1204186|emb|CAA93606.1| mRNA cleavage and polyadenylation specificity factor complex subunit (predicted) [Schizosaccharomyces pombe] [NCBI NR]
  • mRNA cleavage and polyadenylation specificity factor complex subunit [Sanger Pombe]
  • Uncharacterized protein C22H10.05c OS=Schizosaccharomyces pombe GN=SPAC22H10.05c PE=2 SV=1 [Swiss-Prot]
  • Protein clp1 OS=Schizosaccharomyces pombe GN=SPAC22H10.05c PE=2 SV=1 [Swiss-Prot]
  • PUTATIVE CLEAVAGE AND POLYADENYLATION FACTOR; CF IA COMPONENT; SIMILAR TO S. CEREVISIAE CLP1: Q10299; [pompepVF.fasta]
  • Hypothetical protein C22H10.05c in chromosome I [pompep4896]
  • |||putative cleavage and polyadenylation factor [pompepnew.fasta]
  • |||CF I component (subunit A) (predicted)|Schizosaccharomyces pombe|chr 1|||Manual [pombe041504.fasta]
  • putative cleaveage/polyadenylation factor [Schizosaccharomyces pombe]gi|1204186|emb|CAA93606.1| SPAC22H10.05c [Schizosaccharomyces pombe]gi|1723461|sp|Q10299|YD45_SCHPO Hypothetical protein C22H10.05c in chromosome Igi|7492484|pir||T38207 probable clea [nrdb_11152004_Chlamydomonas]
  • |||CF I component |Schizosaccharomyces pombe|chr 1|||Manual [pompep2242005.fasta]
  • (Q10299) Hypothetical protein C22H10.05c in chromosome I [pompep4896_normal_reversed]
  • |||mRNA cleavage and polyadenylation specificity factor complex subunit |Schizosaccharomyces pombe|chr 1|||Manual [SGD_S-Pombe_na_10-23-2009_con_reversed.fasta]
  • SPAC22H10.05c [Schizosaccharomyces pombe] [nr-271106-contam.fasta]
  • hypothetical protein SPAC22H10.05c [Schizosaccharomyces pombe 972h-] [nr-271106-contam.fasta]
  • mRNA cleavage and polyadenylation factor clp1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=clp1 PE=3 SV=1 [uniprot_sprot.fasta.20160308]
    • Organism: Schizosaccharomyces pombe
    Length: 456 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    mRNA cleavage factor complex [ISSLink to PubMed article]
    cytosol [IDALink to PubMed article]
    Biological Process: mRNA 3'-end processing [ISSLink to PubMed article]
    Mo-molybdopterin cofactor biosynthetic process [IEA]
    mRNA polyadenylation [ISSLink to PubMed article]
    mRNA cleavage [ISSLink to PubMed article]
    Molecular Function: GTP binding [IEA]
    ATP binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKEIFIPKEC EWRFEVDEPA IQIRLVSGNA EYFGTELALG PPYHFTRVKG AIYTWQGCTL  60
   61 EVEGEPSVEY VAEETPMSTY LNLHFALEGL RLQAENAAAN DESSYGPCVC LIGPRSCGKT 120
  121 SVLKILESYA LKQSRHPICV NLDPTQPMLA LPGSISAFHN ATILDIQDAD GFGASTSTGP 180
  181 THVLAKVPLV YNFGLDSPLD NPKLYKLSLS RLALAVHSRM SQSKDARVSG CLVDTSSIQE 240
  241 NAEKYQDILH SIITDFRINI IIVLGSERLY SSMKRKYADA TWLSVVKVSS SGGCIDREEE 300
  301 WIQQFQARCI KQYFYGDDRM PLSPLSMIVD STQLVVYRVL EASESGPKSS VLPLGFEEEN 360
  361 TQSEKQDGNT SLRLHGKGEF LERISTEAMT ILQNSILAVS SVGEDEDEAT VVDSCIIGYV 420
  421 FVSDVDDVKN RMTLLSPVPE QLPSNALIMG TCKWQE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..456] PSI-BLAST 79.69897 No description for 2npiA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle