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View Structure Prediction Details

Protein: SPAC22H10.05c
Organism: Schizosaccharomyces pombe
Length: 456 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPAC22H10.05c.

Description E-value Query
Range		 Subject
Range
CLP1_RAT - Polyribonucleotide 5'-hydroxyl-kinase Clp1 OS=Rattus norvegicus GN=Clp1 PE=2 SV=1
CLP1_MOUSE - Polyribonucleotide 5'-hydroxyl-kinase Clp1 OS=Mus musculus GN=Clp1 PE=1 SV=1
 388.0 [0..3] [456..14]
CLP1_BOVIN - Polyribonucleotide 5'-hydroxyl-kinase Clp1 OS=Bos taurus GN=CLP1 PE=2 SV=1
gi|73982630 - gi|73982630|ref|XP_852672.1| PREDICTED: similar to Pre-mRNA cleavage complex II protein Clp1 [Canis ...
 388.0 [0..3] [456..14]
CLP1_MACFA - Polyribonucleotide 5'-hydroxyl-kinase Clp1 OS=Macaca fascicularis GN=CLP1 PE=2 SV=1
gi|109106241 - gi|109106241|ref|XP_001101762.1| PREDICTED: ATP/GTP-binding protein [Macaca mulatta]
CCDS7964.1_1 - null
ENSCJAT00000016978 - null
CLP1 - CLP1, cleavage and polyadenylation factor I subunit, homolog (S. cerevisiae)
 388.0 [0..3] [456..14]
CLP1_CHICK - Polyribonucleotide 5'-hydroxyl-kinase Clp1 OS=Gallus gallus GN=CLP1 PE=2 SV=1
 388.0 [0..1] [456..12]
CLP1_ARATH - Protein CLP1 homolog OS=Arabidopsis thaliana GN=CLPS3 PE=1 SV=1
 382.0 [0..1] [456..23]
gi|66541960 - gi|66541960|ref|XP_623706.1| PREDICTED: similar to CG5970-PA [Apis mellifera]
 369.0 [0..2] [456..9]
cbc-PA - The gene crowded by cid is referred to in FlyBase by the symbol Dmel\cbc (CG5970, FBgn0033842). It i...
gi|220943038 - gi|220943038|gb|ACL84062.1| CG5970-PA [synthetic construct]
 368.0 [0..2] [456..7]
gi|115445039, gi... - gi|50906345|ref|XP_464661.1| putative ATP/GTP-binding protein [Oryza sativa (japonica cultivar-group...
 365.0 [0..2] [456..12]

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Predicted Domain #1
Region A:
Residues: [1-456] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKEIFIPKEC EWRFEVDEPA IQIRLVSGNA EYFGTELALG PPYHFTRVKG AIYTWQGCTL  60
   61 EVEGEPSVEY VAEETPMSTY LNLHFALEGL RLQAENAAAN DESSYGPCVC LIGPRSCGKT 120
  121 SVLKILESYA LKQSRHPICV NLDPTQPMLA LPGSISAFHN ATILDIQDAD GFGASTSTGP 180
  181 THVLAKVPLV YNFGLDSPLD NPKLYKLSLS RLALAVHSRM SQSKDARVSG CLVDTSSIQE 240
  241 NAEKYQDILH SIITDFRINI IIVLGSERLY SSMKRKYADA TWLSVVKVSS SGGCIDREEE 300
  301 WIQQFQARCI KQYFYGDDRM PLSPLSMIVD STQLVVYRVL EASESGPKSS VLPLGFEEEN 360
  361 TQSEKQDGNT SLRLHGKGEF LERISTEAMT ILQNSILAVS SVGEDEDEAT VVDSCIIGYV 420
  421 FVSDVDDVKN RMTLLSPVPE QLPSNALIMG TCKWQE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 79.69897
Match: 2npiA
Description: No description for 2npiA was found.
YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle