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Protein Overview: CLP1_ARATH

General Information:
Name(s) found: CLP1_ARATH [Swiss-Prot]
Description(s) found:
Found 14 descriptions.
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  • Protein CLP1 homolog OS=Arabidopsis thaliana GN=CLPS3 PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 444 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDA]
    mRNA cleavage factor complex [IPI][ISS]
    Biological Process: flower development [IMP]
    vegetative to reproductive phase transition of meristem [IMP]
    mRNA processing [IMP]
    phyllome development [IMP]
    Molecular Function: binding [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAYGGPSMNP PALSGAVPGS ANLKQVKLER ESELRIEVSE EPLRLRVVNG TAEIFGSELP  60
   61 PEIWRTFPPR MKFAVFTWYG ATIEMDGVTE TDYTADETPM VSYINVHAIL DARRRFAKAS 120
  121 TSNDPESSQG PRVIVVGPTD SGKSTLTKML LSWAAKQGWR PTFVDLDVGQ GSITIPGSIA 180
  181 AAPIEMPLDP VEGFPLDMAL VYYYGHASPN MNVELYKALV KELAQVLEKQ FVGNPESRAA 240
  241 GMVINTMGWI EGIGYELLLH AIDTFNASVV LVLGQEKLFS RLKDVLRSKS NVDVVKLHKS 300
  301 GGVVARVKEV RKRSRNFKIQ EYFYGLSKEL SPYANTSSFS DLQVFRIGGG PQAPKSALPA 360
  361 GSTSVSNPLR VTPVNIDDRD LLHSVLAVSY AEEPDQIISS NVSGFVYVTE VNVQKKKITY 420
  421 LAPSPGTLPS KLLVAGSLAW LESV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..444] PSI-BLAST 56.522879 No description for 2npiA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.93

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle