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View Structure Prediction Details

Protein: CLP1_ARATH
Organism: Arabidopsis thaliana
Length: 444 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CLP1_ARATH.

Description E-value Query
Range
Subject
Range
gi|92892674 - gi|92892674|gb|ABE91353.1| Pre-mRNA cleavage complex II Clp1 [Medicago truncatula]
357.0 [0..1] [443..1]

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Predicted Domain #1
Region A:
Residues: [1-444]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAYGGPSMNP PALSGAVPGS ANLKQVKLER ESELRIEVSE EPLRLRVVNG TAEIFGSELP  60
   61 PEIWRTFPPR MKFAVFTWYG ATIEMDGVTE TDYTADETPM VSYINVHAIL DARRRFAKAS 120
  121 TSNDPESSQG PRVIVVGPTD SGKSTLTKML LSWAAKQGWR PTFVDLDVGQ GSITIPGSIA 180
  181 AAPIEMPLDP VEGFPLDMAL VYYYGHASPN MNVELYKALV KELAQVLEKQ FVGNPESRAA 240
  241 GMVINTMGWI EGIGYELLLH AIDTFNASVV LVLGQEKLFS RLKDVLRSKS NVDVVKLHKS 300
  301 GGVVARVKEV RKRSRNFKIQ EYFYGLSKEL SPYANTSSFS DLQVFRIGGG PQAPKSALPA 360
  361 GSTSVSNPLR VTPVNIDDRD LLHSVLAVSY AEEPDQIISS NVSGFVYVTE VNVQKKKITY 420
  421 LAPSPGTLPS KLLVAGSLAW LESV

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 56.522879
Match: 2npiA
Description: No description for 2npiA was found.

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