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Protein Overview: SPAC4H3.04c

General Information:
Name(s) found: SPAC4H3.04c [Sanger Pombe]
Description(s) found:
Found 17 descriptions.
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  • UPF0103 family [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 309 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article][ISSLink to PubMed article]
    cytoplasm [ISSLink to PubMed article]
    cytosol [IDALink to PubMed article]
    Biological Process: cellular response to stress [IEPLink to PubMed article]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSQAIREATH AGSWYLDDTE LLTKQLKSFI KNPTPETGKR FVISPHAGYM YSGKVASQGF  60
   61 QQLDFSKIQR VFVFGPSHHI FTRKCLVSRA SICSTPLGDL KVDEDLCQKL VASDNSFDSM 120
  121 TLDVDESEHS LEMQFPLLAF HLLKQGCLGK VKIVPIMIGA LTSTTMMAAA KFLSQYIKDE 180
  181 SNSFVISSDF CHWGRRFGYT LYLNDTNQLE DAVLKYKRRG GPTSPKIYES ISNLDHIGMK 240
  241 IIETKSSDDF SEYLKTTQNT ICGRYPIELI MKSMECANFS ERFKFISYAQ SSHVELVTDS 300
  301 SVSYATATA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..309] FFAS03 3.66 LigB subunit of an aromatic-ring-opening dioxygenase LigAB


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.76

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle