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Protein Overview: ucp6

General Information:
Name(s) found: ucp6 / SPAC3F10.13 [Sanger Pombe]
Description(s) found:
Found 17 descriptions.
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  • UBA domain protein Ucp6 [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 612 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article][ISSLink to PubMed article]
    cytoplasm [ISSLink to PubMed article]
    cytosol [IDALink to PubMed article]
    Biological Process: protein deubiquitination [ISSLink to PubMed article]
    Molecular Function: ubiquitin binding [TASLink to PubMed article]
    polyubiquitin binding [TASLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEDLDTKIKT LKNMGVSESD AKDSLERCGY DVESAAEFIF SGQLEKSRLV PIMSSTSIAS  60
   61 SLPSYQDTFF LPSPRKRRRL PGRIGTVLKP SALFPAIAPF LFVVFEIPVA LNTFVHATCK 120
  121 GLLFAEDNAS FHRPFTDVSA HLSSSSLSKY NHHSNHRLAS PGWWYGEDSC ISQSLDPRSV 180
  181 MQVQTIRAFE FLFSSHRLYL DTVHITAALS QVLAGLGNTN TSMSDGDCIA AFLSSYFSPP 240
  241 NAEFDSTFCS TLSSLTNSEK PTYIFNFKPN STPDLRLSIE SCLDLLLHPP SSAQKNWSWI 300
  301 KHVGKVFCCS LPGNNASGTP RFLLTPKIDL SKCIIENRDE MLRRYQLETV YRKTLLEWED 360
  361 LYKRLTGVTL TDKDIGELLT DGQQFLEKRN PALSSHLQLL KETLQTKIST LISNTNATQH 420
  421 KLSTLYRGMQ NKCTRRLLAV IIEPSIIYIC LKNSAVQSNR NVSPSANHNE QWYLVRFTTS 480
  481 ATISQDSPPC IVEPVTFEEV DLEFEKHISY HNRLLIYVDD DCEASTRTVI PTSVKNFIAE 540
  541 DNEYFDDELA GIIHSPTVST RSSRSSDVSE YDLEDQGGLQ LTVPHINTDV QCHRSRNSAC 600
  601 EFPESMHVEH SG

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..79] FFAS03 1.1 Solution Structure of RSGI RUH-012, a UBA Domain from Mouse cDNA
    2 View Details [80..160] deduced N/A No confident structure predictions are available.
    3 View Details [161..315] deduced N/A No confident structure predictions are available.
    4 View Details [316..612] deduced N/A No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • small conjugating protein-specific protease activity
    		•  2.71271041474697 bayes_pls_golite062009
  • ubiquitin-specific protease activity
    		•  2.60822531662407 bayes_pls_golite062009
  • cysteine-type peptidase activity
    		•  1.89678318965687 bayes_pls_golite062009
  • binding
    		•  1.771454265561 bayes_pls_golite062009
  • protein binding
    		•  1.15277727477352 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.605372479737519 bayes_pls_golite062009
  • ubiquitin binding
    		•  0.319972124839967 bayes_pls_golite062009
  • catalytic activity
    		•  0.2736776367506 bayes_pls_golite062009
  • DNA binding
    		•  0.231060944599623 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.198503229187597 bayes_pls_golite062009
  • small conjugating protein binding
    		•  0.148403739682047 bayes_pls_golite062009
  • enzyme binding
    		•  0.133222626367861 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.
    4 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle