YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: SPAC3F10.06c

General Information:
Name(s) found: SPAC3F10.06c [Sanger Pombe]
Description(s) found:
Found 17 descriptions.
SHOW ALL
  • initiator methionine tRNA 2'-O-ribosyl phosphate transferase [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 453 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    cytoplasm [ISSLink to PubMed article]
    cytosol [IDALink to PubMed article]
    Biological Process: charged-tRNA amino acid modification [ISSLink to PubMed article]
    Molecular Function: tRNA A64-2'-O-ribosylphosphate transferase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDEFDPLDAV QQIHVQARHP KNRLLSIAHD AKFVDSVIAS YPTFKPVVNE RCGTWYVNRR  60
   61 HAPISVYFKS TDGHTGQWSF SCRRLNLHLL NEITTCDGLI IVDSTRRGKR MPDALSKTIP 120
  121 IWIATLNKCV FERLRPHSFP NARLAFLPPF LPDTEKSSIL QRLDGFVDSL MQSGIDLDAL 180
  181 AAKLTKPIRP LWVTPASRLT SAQFEEYFTV VLVTASAQVQ NGYSREHGFL YVQGAADDEE 240
  241 EWSHGLTPEV FWQNTESILT CPEEQLEQKI SLLLSSTRNS PTMSNSSLTH LLPTPIFVGD 300
  301 VTGFYPPPEN TSYFVLNLSN TTLNVKNELC FPIPSGKKGA PVFRKHFPSI LQELNSLDPP 360
  361 FYERDAIFIV DEGNAKEAAS CLALMILCLY YDLHMHLLAH PISLSASQSH LTKQTVRQFL 420
  421 VKITELHSKT NPSRAFLLAV NSLLLSANTI ATS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..118] MSA 1.02696 View MSA. No confident structure predictions are available.
    2 View Details [119..278] deduced N/A No confident structure predictions are available.
    3 View Details [279..453] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.90

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle