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Protein Overview: SPAC27F1.05c

General Information:
Name(s) found: SPAC27F1.05c [Sanger Pombe]
Description(s) found:
Found 19 descriptions.
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  • aminotransferase class-III, unknown specificty [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 484 amino acids

    Gene Ontology:
    Cellular Component: cytoplasm [IDALink to PubMed article]
    cytosol [IDALink to PubMed article]
    Biological Process: cellular response to stress [IEPLink to PubMed article]
    Molecular Function: pyridoxal phosphate binding [ISSLink to PubMed article]
    transaminase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIDSTSTATA TSKTVELNTN GSKTDASSEN GTASNYPEGL WCFDEAMKMD PETTVKLQLD  60
   61 HLNKLRTVHG HARNFVKADN SRFVDEKGTE HLDLIGGVGV VTVGNNNQYV WDCLQKCFDA 120
  121 KLYMMGAISY RNLAAAFGRN MALLSPGQKL TRTWTATGGA EANEGVIKLI RLATRYKPNK 180
  181 KKFLSTLNSF HGKTTGAVFL GGKEKWQKYQ SPAPFDVDYV PYGDAEALQV ALSSGMYRSF 240
  241 IVEPIQGEGG VIVPPPGYLA KARELCTKYD TYLVLDEIQT GCGRTGKFWA CEYENIIPDC 300
  301 IAFAKGFSGG LIPFAGYIAT EELWNAAYNS LETAFLHTAT YQENTLGLAA GVATIDYIVQ 360
  361 NDLLSRCRKL GGIMFDRLNK LQTKFPHVMK DVRGRGMIVG IEFYPIPESV QEEFGEYYAT 420
  421 PIVNDLADTY HVQVYCSLNN PSVFRFLPPL TIPEADLDEG LSAVESAVAK FDAKVKEAVA 480
  481 AKST

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..484] PSI-BLAST 86.69897 Ornithine aminotransferase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • 4-aminobutyrate transaminase activity
    		•  3.63797881096751 bayes_pls_golite062009
  • L-aspartate:2-oxoglutarate aminotransferase activity
    		•  2.30133284041702 bayes_pls_golite062009
  • catalytic activity
    		•  2.29878871754893 bayes_pls_golite062009
  • adenosylmethionine-8-amino-7-oxononanoate transaminase activity
    		•  1.74778109525713 bayes_pls_golite062009
  • glycine dehydrogenase (decarboxylating) activity
    		•  1.63055151623667 bayes_pls_golite062009
  • oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor
    		•  1.63055151623667 bayes_pls_golite062009
  • N-succinyltransferase activity
    		•  1.52003194822848 bayes_pls_golite062009
  • transferase activity
    		•  1.44093490824786 bayes_pls_golite062009
  • N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
    		•  1.4383564662931 bayes_pls_golite062009
  • glutamate decarboxylase activity
    		•  1.34215658716536 bayes_pls_golite062009
  • transferase activity, transferring nitrogenous groups
    		•  1.28316822767388 bayes_pls_golite062009
  • transaminase activity
    		•  1.24990480711889 bayes_pls_golite062009
  • transferase activity, transferring acyl groups
    		•  1.19150094103499 bayes_pls_golite062009
  • succinate-semialdehyde dehydrogenase binding
    		•  0.78144409237642 bayes_pls_golite062009
  • carbon-sulfur lyase activity
    		•  0.698312655247044 bayes_pls_golite062009
  • binding
    		•  0.605886907698173 bayes_pls_golite062009
  • 5-aminolevulinate synthase activity
    		•  0.54326874956263 bayes_pls_golite062009
  • ornithine-oxo-acid transaminase activity
    		•  0.311107335626334 bayes_pls_golite062009
  • N-acyltransferase activity
    		•  0.2609065149092 bayes_pls_golite062009
  • kynureninase activity
    		•  0.242752584041108 bayes_pls_golite062009
  • pyridoxal phosphate binding
    		•  0.16957228630576 bayes_pls_golite062009
  • vitamin B6 binding
    		•  0.16957228630576 bayes_pls_golite062009
  • cystathionine beta-lyase activity
    		•  0.15938456446406 bayes_pls_golite062009
  • sulfurtransferase activity
    		•  0.0450490929307473 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.013097682076602 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle