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Protein Overview: vma2

General Information:
Name(s) found: vma2 / SPAC637.05c [Sanger Pombe]
Description(s) found:
Found 19 descriptions.
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  • V-type ATPase V1 subunit B [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 503 amino acids

    Gene Ontology:
    Cellular Component: vacuolar proton-transporting V-type ATPase, V1 domain [ISSLink to PubMed article]
    cytoplasm [IDALink to PubMed article]
    Biological Process: ATP hydrolysis coupled proton transport [ISSLink to PubMed article]
    vacuolar acidification [ISSLink to PubMed article]
    ATP synthesis coupled proton transport [IEA]
    Molecular Function: proton-transporting ATPase activity, rotational mechanism [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASLFDINAA AAVKDYSIKP RLSYNTVNSI TGPLVILDNI RRPQYNEIVN LNLPDGSVRS  60
   61 GQVLEVAGHK AIVQVFEGTS GVDVRKTTID FTGHSMRIPV SEDMLGRVFN GSGLPIDKGP 120
  121 NLLAEDYLDI NGSPINPYAR IYPEEMIQTG ISSIDGLNSI ARGQKIPIFS AAGLPHNEIA 180
  181 AQICRQAGLV KRPTKDVHDG HEDNFSIVFA AMGVNLETAR FFQRDFEENG SFERVTLFLN 240
  241 LANDPTIERI ITPRLALSAS EFLAYQTEKH VLTILTDMTS YADALREVSA AREEVPGRRG 300
  301 YPGYMYTDLS TIYERAGRVE GRNGSITQIP ILTMPNDDIT HPIPDLTGYI TEGQIFVDRQ 360
  361 LHNNAIYPPI NVLPSLSRLM KSAIGEGMTR NDHGDVSNQL YAMYAIGRDA ASMKSVVGEE 420
  421 ALSQEDRLAL EFLGKFEKTF ISQGAYENRT IFETLDLAWS LLRIFPREML TRIPKKILDQ 480
  481 YYSRSSAYTE SSKDVIDNTP ESS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..503] PSI-BLAST 112.0 No description for 2c61A was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle