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Protein Overview: vma6

General Information:
Name(s) found: vma6 / SPAC17A2.03c [Sanger Pombe]
Description(s) found:
Found 19 descriptions.
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  • V-type ATPase subunit d [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 343 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    vacuolar proton-transporting V-type ATPase complex [ICLink to PubMed article]
    proton-transporting V-type ATPase, V0 domain [IEA]
    Biological Process: ATP hydrolysis coupled proton transport [ICLink to PubMed article]
    vacuolar acidification [TASLink to PubMed article]
    ATP synthesis coupled proton transport [IEA]
    Molecular Function: ATP binding [ICLink to PubMed article]
    proton-transporting ATPase activity, rotational mechanism [NASLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDALSFNTNS GYIEALVRGY ESALLEQHIY SNLSQCESLE DFRLQLSSTD YGGFLANQSK  60
   61 LTSSIISAKA TEKLLDEFDL IRRQADETLS KFMDYITYAY MIDNIMLLLT GTVNGQDTHD 120
  121 LLERCHPLGW FETLPALCVA TNVEELYSVV LIETPLAPYF KDCLSADDLD EQHIEIIRNT 180
  181 LYKAYLEDFY NFCKKIGACT ADTMLPILEF EADRRAITIT INSFGTELSK EERAKMYPSF 240
  241 GRLYPFSTSI LARAENAGDV ENACSLVKEY SDFFDQNSQK SLDDHFNEKE VELNKLAFLQ 300
  301 QFHYGIVYAF LKLREQEIRN LTWIAECISQ NQRDRALNIV PIL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..343] PSI-BLAST 52.30103 Crystal Structure of Subunit C of V-ATPase


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle