YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: ung1

General Information:
Name(s) found: ung1 / SPCC1183.06 [Sanger Pombe]
Description(s) found:
Found 20 descriptions.
SHOW ALL
  • uracil DNA N-glycosylase Ung1 [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 322 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    mitochondrion [IDALink to PubMed article]
    Biological Process: DNA repair [IMPLink to PubMed article]
    base-excision repair [IEA]
    Molecular Function: uracil DNA N-glycosylase activity [IMPLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTVLNTTDKR KADDTVNKLD GKLKQPRLDN FFKTNTSSPA LKDTQVLDNK ENNSVSKFNK  60
   61 EKWAENLTPA QRKLLQLEID TLESSWFDAL KDEFLKPYFL NLKEFLMKEW QSQRVFPPKE 120
  121 DIYSWSHHTP LHKTKVILLG QDPYHNIGQA HGLCFSVRPG IPCPPSLVNI YKAIKIDYPD 180
  181 FVIPKTGYLV PWADQGILML NASLTVRAHQ AASHSGKGWE TFTSAVLQVA LNRNRKGLVI 240
  241 LAWGTPAAKR LQGLPLKAHY VLRSVHPSPL SAHRGFFECH HFKKTNEWLE EQYGPEKCIN 300
  301 WSAVSEQKAK IKSSELESSS TE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..81] deduced N/A No confident structure predictions are available.
    2 View Details [82..322] PSI-BLAST 105.0 Uracil-DNA glycosylase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • DNA N-glycosylase activity
    		•  5.22461096584694 bayes_pls_golite062009
  • hydrolase activity, hydrolyzing N-glycosyl compounds
    		•  4.68115068202636 bayes_pls_golite062009
  • uracil DNA N-glycosylase activity
    		•  4.48822773983461 bayes_pls_golite062009
  • hydrolase activity, acting on glycosyl bonds
    		•  2.66280504021689 bayes_pls_golite062009
  • single-strand selective uracil DNA N-glycosylase activity
    		•  2.14678866447561 bayes_pls_golite062009
  • hydrolase activity
    		•  1.91716804176625 bayes_pls_golite062009
  • catalytic activity
    		•  1.59111295908728 bayes_pls_golite062009
  • mismatch base pair DNA N-glycosylase activity
    		•  1.34999321643757 bayes_pls_golite062009
  • binding
    		•  1.2276262882727 bayes_pls_golite062009
  • structure-specific DNA binding
    		•  1.22310035950527 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.901890891144085 bayes_pls_golite062009
  • DNA binding
    		•  0.850361767185031 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.543168797464517 bayes_pls_golite062009
  • single-stranded DNA binding
    		•  0.48698673207018 bayes_pls_golite062009
  • protein binding
    		•  0.272261244770552 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle