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Protein Overview: taf1

General Information:
Name(s) found: taf1 / SPAC7D4.04 [Sanger Pombe]
Description(s) found:
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  • pir||T39082 hypothetical protein SPAC7D4.04 - fission yeast (Schizosaccharomyces pombe) [NCBI NR]
  • gi|4582195|emb|CAB16721.2| Taz1 interacting factor 1, autophagy protein [Schizosaccharomyces pombe] [NCBI NR]
  • gi|29839446|sp|O14261.2|TAF1_SCHPO RecName: Full=Taz1-interacting factor 1; Short=Protein taf1 [NCBI NR]
  • gi|19114767|ref|NP_593855.1| Taz1 interacting factor 1 [Schizosaccharomyces pombe] [NCBI NR]
  • Taz1 interacting factor 1 [Sanger Pombe]
  • Taz1-interacting factor 1 OS=Schizosaccharomyces pombe GN=taf1 PE=1 SV=2 [Swiss-Prot]
  • HYPOTHETICAL PROTEIN; SEQUENCE ORPHAN; PREDICTED COILED-COIL REGION: O14261; [pompepVF.fasta]
  • Taz1 interacting factor 1 (Protein taf1) [pompep4896]
  • |taf1||required for the response to nitrogen starvation (PMID 11270572) [pompepnew.fasta]
  • |taf1||involved in response to nitrogen starvation (required) (PMID 11270572)|Schizosaccharomyces pombe|chr 1|||Manual [pombe041504.fasta]
  • hypothetical protein [Schizosaccharomyces pombe]gi|4582195|emb|CAB16721.2| SPAC7D4.04 [Schizosaccharomyces pombe]gi|29839446|sp|O14261|TAF1_SCHPO Taz1 interacting factor 1 (Protein taf1)gi|7491237|pir||T39082 hypothetical protein SPAC7D4.04 - fission y [nrdb_11152004_Chlamydomonas]
  • |taf1||Taz1 interacting factor 1|Schizosaccharomyces pombe|chr 1|||Manual [pompep2242005.fasta]
  • (O14261) Taz1 interacting factor 1 (Protein taf1) [pompep4896_normal_reversed]
  • |taf1||Taz1 interacting factor 1, autophagy protein|Schizosaccharomyces pombe|chr 1|||Manual [SGD_S-Pombe_na_10-23-2009_con_reversed.fasta]
  • SPAC7D4.04 [Schizosaccharomyces pombe] [nr-271106-contam.fasta]
  • hypothetical protein SPAC7D4.04 [Schizosaccharomyces pombe 972h-] [nr-271106-contam.fasta]
  • Taz1-interacting factor 1 (Protein taf1) [nr-271106-contam.fasta]
  • |taf1|cvt9, atg11|Taz1 interacting factor 1, autophagy protein|Schizosaccharomyces pombe|chr 1|||Manual [Other_S_Pombe_12-15-2011_reversed.fasta]
    • Organism: Schizosaccharomyces pombe
    Length: 926 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    cytoplasm [IDALink to PubMed article]
    pre-autophagosomal structure [ISS]
    extrinsic to membrane [ISS]
    Biological Process: protein localization to pre-autophagosomal structure [ISS]
    induction of conjugation upon nitrogen starvation [IMPLink to PubMed article]
    autophagy [ISS]
    peroxisome degradation [ISS]
    telomere maintenance [ISSLink to PubMed article]
    protein targeting to vacuole [ISSLink to PubMed article]
    CVT pathway [ISS]
    cellular response to nitrogen starvation [IMPLink to PubMed article]
    Molecular Function: protein binding [IPILink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRFRLNDSFS GKSWTIDNVQ WTPQNLVAWI MELNIGLSDE AKLLLPNGMS LNETVLNSES  60
   61 DVVIYVLDQN LLTFTYDGDK IPSIPSLKGQ PISNVLTGII ADSSSDQWKD KISKCLSLLS 120
  121 DILESSSKIH NQLSVCHDEY STSIVSPEVA MNYLQRRQSG MKDLLFVFYE RLDRVSVSDL 180
  181 LHDFLALPTG SLPITPLKIL STNWTKLDSW LNSISARYAE AQKRVQQCIG AANSIIVSPF 240
  241 KEVPSIKEGD DAYYHLRSVA QDAANILQEI LKIESTSTTS QIKPKCNYET EITDCMEKLQ 300
  301 SNLSELKSSR KSSLISLKSF WLSFYKVSLR YDALYEYLRQ IAEELDRSKF VLSQSRNIFS 360
  361 LYIDILMEAL RRTEWQESYN VSHDSSLPLD QEKELSLRKS WLSHFSNLLF NHGQLKYLPV 420
  421 LTRDEISNYL LNIQAHPNYQ TFHQMLSNRL SEYLGFPGSP REAVSNTVQA NNSLHEKLAM 480
  481 YQNRCNNLEA MLSHQNGFNY NINNDGLSPN APHPPINEQS NSSQPFYRVS PSIVPLNVIR 540
  541 KLTNRKTSFT DSHILRLQDE VNQLRNELDL VNKRNEDLLI ELQGKEEKIQ YLETENEEVL 600
  601 QKYENLQEEL SSTRKLLTKN EAAVAEQQSN EEMHSNEPNI LNLYSVFEGK VDSLQELYNA 660
  661 FKLQLTSLKQ KGEYATLAKD AEAVQHIIEE RDYALAEKAD LLKLSENRKE QCKILTQKLY 720
  721 TIVFRCNELQ SVLRECVTQP GFDSDNERDG HASIPDRQIE FNSKDLQYLY WMDGEDADRN 780
  781 FQEFLNRMSS LDFDSFHNFV VSVLTQAHNH ELRWKREFQS NRDKALKAIL DSQSKVSLRN 840
  841 FKQGSLVLFL PTRRTAGNKK VWAAFNVNAP HYYLNTQPHL KLESRDWMLG RVTSIEDRTA 900
  901 DDSTDKWLRL PSGTIWHLVE AIDERF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..317] PSI-BLAST 15.0 Heavy meromyosin subfragment
    2 View Details [318..377] PSI-BLAST 9.09691 Tropomyosin
    3 View Details [378..926] FFAS03 1.23 COLICIN IA


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle