YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: ths1

General Information:
Name(s) found: ths1 / SPBC25H2.02 [Sanger Pombe]
Description(s) found:
Found 18 descriptions.
SHOW ALL
  • threonine-tRNA ligase Ths1 [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 703 amino acids

    Gene Ontology:
    Cellular Component: cytoplasm [ISSLink to PubMed article]
    cytosol [IDALink to PubMed article]
    Biological Process: threonyl-tRNA aminoacylation [ISSLink to PubMed article]
    Molecular Function: ATP binding [IEA]
    threonine-tRNA ligase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSAAAVKGVQ ASLDNLSLEI PFIQHRLDLF DKLQKEYKES LATKPREEID ITLPDGKVIK  60
   61 GTSWETTPIS IAASISKGLA DRVTVAIVNG EPWDLTRPLE ASCTLKLCDF NDPEGKRVFW 120
  121 HSSAHILGEA TELSFHCHLC IGPPTDEGFF YEMGIDNGRV ITNDDYSSIE SYAKQAIKQK 180
  181 QPFERLVISK EGLLEMFRYN KYKQYIIQTK IPDGASTTVY RCGPLIDLCT GPHVPHTGRI 240
  241 KSFAVTKNSS SYFLGDAKND SLQRVYGISF PDNKQMQEYK TFLAEAAKRD HRKIGRDQEL 300
  301 FFFNEISPGS CFFLPHGARI YNTLLKYMRY QYSKRGYQEV ITPNMYNVNL WKTSGHWNNY 360
  361 SENMFSFDIE KEKYALKPMN CPGHCVMFKS RDRSYRDLPW RVADFGVLHR NEFSGALSGL 420
  421 TRVRRFQQDD AHIFCTPDQV RSEIEGCFDF LKEVYGTFGF TFHLELSTRP EEKYLGDLAT 480
  481 WDKAEAQLKA ALDASGYKWE LNAGDGAFYG PKIDITVFDA LKRQHQCATI QLDFQLPERF 540
  541 QLEFHAPASA EEAKESGNNN KYTRPVMVHR AILGSLERMI AILTEHYAGK WPFWMSPRQV 600
  601 CIIPVSAAAY NYADKVHNIL SEADIFVDTD KSDNTLPKKI RNAQLAQYNF IFVVGAEEES 660
  661 TNSVNVRNRD DPKKQSKGST VAVEEVVKKL LKLKESKSLI NDL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..703] PSI-BLAST 148.0 Threonyl-tRNA synthetase (ThrRS), C-terminal domain; Threonyl-tRNA synthetase (ThrRS), N-terminal 'additional' domain; Threonyl-tRNA synthetase (ThrRS), second 'additional' domain; Threonyl-tRNA synthetase (ThrRS)

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • ligase activity, forming aminoacyl-tRNA and related compounds
    		•  7.89468709683036 bayes_pls_golite062009
  • ligase activity, forming carbon-oxygen bonds
    		•  7.89468709683036 bayes_pls_golite062009
  • aminoacyl-tRNA ligase activity
    		•  7.88410036819636 bayes_pls_golite062009
  • ligase activity
    		•  6.92073480193262 bayes_pls_golite062009
  • threonine-tRNA ligase activity
    		•  6.47381405106149 bayes_pls_golite062009
  • phenylalanine-tRNA ligase activity
    		•  3.22631630581238 bayes_pls_golite062009
  • serine-tRNA ligase activity
    		•  2.46505535069103 bayes_pls_golite062009
  • glycine-tRNA ligase activity
    		•  2.29229136935761 bayes_pls_golite062009
  • catalytic activity
    		•  1.99372273395202 bayes_pls_golite062009
  • alanine-tRNA ligase activity
    		•  1.82594054955281 bayes_pls_golite062009
  • lysine-tRNA ligase activity
    		•  1.72324031407565 bayes_pls_golite062009
  • histidine-tRNA ligase activity
    		•  1.72215103383322 bayes_pls_golite062009
  • binding
    		•  1.11470390774037 bayes_pls_golite062009
  • transcription regulator activity
    		•  1.0753492604686 bayes_pls_golite062009
  • asparagine-tRNA ligase activity
    		•  0.921492123574877 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.897558352141977 bayes_pls_golite062009
  • DNA binding
    		•  0.854148126675211 bayes_pls_golite062009
  • RNA binding
    		•  0.576453255038334 bayes_pls_golite062009
  • transcription repressor activity
    		•  0.55217603492525 bayes_pls_golite062009
  • transcription factor activity
    		•  0.283508546234551 bayes_pls_golite062009
  • aspartate-tRNA ligase activity
    		•  0.00572514744734753 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle