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Protein Overview: sum2

General Information:
Name(s) found: sum2 / SPBC800.09 [Sanger Pombe]
Description(s) found:
Found 18 descriptions.
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  • G2/M transition checkpoint protein Sum2 [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 426 amino acids

    Gene Ontology:
    Cellular Component: cytoplasm [IDALink to PubMed article]
    Biological Process: mitotic cell cycle G2/M transition DNA damage checkpoint [IGILink to PubMed article]
    G2/M transition of mitotic cell cycle [IMPLink to PubMed article]
    Molecular Function: protein binding [IPILink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTEFIGSRIS LISKSDIRYV GILQDINSQD STLALKHVRW CGTEGRKQDP SQEIPPSDNV  60
   61 FDYIVFRGSD VKDLRIEEPA TTPSAPPVQP PNDPAIIGSN SGQYNWNQAQ TAQPPQPVQP 120
  121 NPYGAPYQQA PPAGAPYYMY PNAPAQFVPP GGLPLGTPLD ASTPAVPYYG APDQQQMGQR 180
  181 PEFAQNVSQG FAGQAPYNVR PGYGMPSNQK PPNFAPGMPA PGPTAVSASP SLQSMPPTNG 240
  241 VIPGAQPSIE ASIEKESTSI RNSTVTNDRV VNTTVDVSQS QTVETSGPSK EVPTTQPDAS 300
  301 AAKPRTEFDF QTANQKFQSM KDDLLKGKND EEAEEFYKPK QSFFDNISCE SKEKGMEAAD 360
  361 RRALRDRERS LNMETFGVAG SGNRGRRGRG RGRGGRGRGR GYARNQYNQY RNSNGSQPRA 420
  421 QPANDQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..82] PSI-BLAST 18.69897 NMR Solution Structure of protein from Zebra Fish Dr.13312
    2 View Details [83..333] PSI-BLAST 3.39794 Sec24
    3 View Details [334..426] deduced N/A No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  1.99976233340317 bayes_pls_golite062009
  • nucleic acid binding
    		•  1.1826185875454 bayes_pls_golite062009
  • protein binding
    		•  0.418315253537627 bayes_pls_golite062009
  • RNA binding
    		•  0.267776283671624 bayes_pls_golite062009
    		• 0.152272502656765 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle