| Protein: | sum2 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 426 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for sum2.
| Description | E-value | Query Range |
Subject Range |
|
|
163.0 | [0..2] | [380..7] |
|
|
151.0 | [0..2] | [380..7] |
|
|
149.0 | [0..2] | [379..5] |
|
|
147.0 | [0..2] | [379..5] |
|
|
146.0 | [0..2] | [379..5] |
|
|
146.0 | [0..2] | [380..73] |
|
Region A: Residues: [1-82] |
1 11 21 31 41 51
| | | | | |
1 MTEFIGSRIS LISKSDIRYV GILQDINSQD STLALKHVRW CGTEGRKQDP SQEIPPSDNV 60
61 FDYIVFRGSD VKDLRIEEPA TT
|
| Detection Method: |  |
| Confidence: | 18.69897 |
| Match: | 2fb7A |
| Description: | NMR Solution Structure of protein from Zebra Fish Dr.13312 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.99976233340317 | bayes_pls_golite062009 |
| nucleic acid binding | 1.1826185875454 | bayes_pls_golite062009 |
| protein binding | 0.418315253537627 | bayes_pls_golite062009 |
| RNA binding | 0.267776283671624 | bayes_pls_golite062009 |
| 0.152272502656765 | bayes_pls_golite062009 |
|
Region A: Residues: [83-333] |
1 11 21 31 41 51
| | | | | |
1 PSAPPVQPPN DPAIIGSNSG QYNWNQAQTA QPPQPVQPNP YGAPYQQAPP AGAPYYMYPN 60
61 APAQFVPPGG LPLGTPLDAS TPAVPYYGAP DQQQMGQRPE FAQNVSQGFA GQAPYNVRPG 120
121 YGMPSNQKPP NFAPGMPAPG PTAVSASPSL QSMPPTNGVI PGAQPSIEAS IEKESTSIRN 180
181 STVTNDRVVN TTVDVSQSQT VETSGPSKEV PTTQPDASAA KPRTEFDFQT ANQKFQSMKD 240
241 DLLKGKNDEE A
|
| Detection Method: | |
| Confidence: | 3.39794 |
| Match: | 1m2vB |
| Description: | Sec24 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [334-426] |
1 11 21 31 41 51
| | | | | |
1 EEFYKPKQSF FDNISCESKE KGMEAADRRA LRDRERSLNM ETFGVAGSGN RGRRGRGRGR 60
61 GGRGRGRGYA RNQYNQYRNS NGSQPRAQPA NDQ
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
