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Protein Overview: sbp1

General Information:
Name(s) found: sbp1 / SPBC1773.07c [Sanger Pombe]
Description(s) found:
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  • gi|3850085|emb|CAA21912.1| Ran GTPase binding protein Sbp1 [Schizosaccharomyces pombe] [NCBI NR]
  • gi|19111914|ref|NP_595122.1| Ran GTPase binding protein Sbp1 [Schizosaccharomyces pombe 972h-] [NCBI NR]
  • gi|1408521|dbj|BAA13080.1| Ran/spi1 binding protein [Schizosaccharomyces pombe] [NCBI NR]
  • gi|12643713|sp|Q09717.1|RANG_SCHPO RecName: Full=Ran-specific GTPase-activating protein 1; AltName: Full=Ran-binding protein 1; Short=RANBP1; AltName: Full=Spi1-binding protein [NCBI NR]
  • gi|11359298|pir||T43209 Ran/spi1-binding protein sbp1 - fission yeast (Schizosaccharomyces pombe) [NCBI NR]
  • Ran GTPase binding protein Sbp1 [Sanger Pombe]
  • Ran-specific GTPase-activating protein 1 OS=Schizosaccharomyces pombe GN=sbp1 PE=1 SV=1 [Swiss-Prot]
  • RAN/SPI1 BINDING PROTEIN.: O42635;Q09717; [pompepVF.fasta]
  • RAN/SPI1 BINDING PROTEIN.: ;N0ACC; [pompepV13]
  • Ran-specific GTPase-activating protein 1 (Ran binding protein 1) (RANBP1) (Spi1-binding protein) [pompep4896]
  • |sbp1|yrb1|spi1p GTP-binding protein (PMID 9504913) [pompepnew.fasta]
  • |sbp1|yrb1|GTP-binding protein (PMID 9504913)|Schizosaccharomyces pombe|chr 2|||Manual [pombe041504.fasta]
  • |sbp1|yrb1|GTP-binding |Schizosaccharomyces pombe|chr 2|||Manual [pompep2242005.fasta]
  • ran/spi1 binding protein. [Schizosaccharomyces pombe]gi|3850085|emb|CAA21912.1| sbp1 [Schizosaccharomyces pombe]gi|12643713|sp|Q09717|RANG_SCHPO Ran-specific GTPase-activating protein 1 (Ran binding protein 1) (RANBP1) (Spi1-binding protein)gi|11359298 [nrdb_11152004_Chlamydomonas]
  • (Q09717) Ran-specific GTPase-activating protein 1 (Ran binding protein 1) (RANBP1) (Spi1-binding protein) [pompep4896_normal_reversed]
  • |sbp1|yrb1|Ran GTPase binding protein Sbp1|Schizosaccharomyces pombe|chr 2|||Manual [SGD_S-Pombe_na_10-23-2009_con_reversed.fasta]
  • SPBC1773.07c [Schizosaccharomyces pombe] [nr-271106-contam.fasta]
  • Ran-specific GTPase-activating protein 1 (Ran-binding protein 1) (RANBP1) (Spi1-binding protein) [nr-271106-contam.fasta]
  • Spi1p GTP-binding protein [Schizosaccharomyces pombe 972h-] [nr-271106-contam.fasta]
  • Ran/spi1 binding protein [Schizosaccharomyces pombe] [nr-271106-contam.fasta]
  • Ran-specific GTPase-activating protein 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=sbp1 PE=1 SV=1 [uniprot_sprot.fasta.20160308]
    • Organism: Schizosaccharomyces pombe
    Length: 215 amino acids

    Gene Ontology:
    Cellular Component: cytosol [IDALink to PubMed article]
    Biological Process: Ran protein signal transduction [IGILink to PubMed article]
    RNA export from nucleus [ISS]
    protein import into nucleus [ISS]
    Molecular Function: GTP binding [TASLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSAEQEKKTQ GTTKEEQKSS FASEDVASKQ TEEAKAVFGD GVAKQENKSG ASTNDEKKPA  60
   61 EGDEDAEPAS PEVHFEPIVK LSAVETKTNE EEETVEFKMR AKLFRFDKAA SEWKERGTGD 120
  121 ARLLKHKETG KTRLVMRRDK TLKVCANHLL MPEMKLTPNV GSDRSWVWTV AADVSEGEPT 180
  181 AETFAIRFAN SENANLFKEN FEKYQEENAK ILKKN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..215] PSI-BLAST 44.30103 Ran-binding protein 1, Ranbp1

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  3.29080729281876 bayes_pls_golite062009
  • protein binding
    		•  2.12168271674167 bayes_pls_golite062009
  • GTPase regulator activity
    		•  1.66986263418539 bayes_pls_golite062009
  • nucleoside-triphosphatase regulator activity
    		•  1.64990514605397 bayes_pls_golite062009
  • small GTPase regulator activity
    		•  1.2550809703725 bayes_pls_golite062009
  • enzyme regulator activity
    		•  1.25381967078645 bayes_pls_golite062009
  • Ran GTPase binding
    		•  1.07023555877478 bayes_pls_golite062009
  • small GTPase binding
    		•  0.8507658747425 bayes_pls_golite062009
  • GTPase binding
    		•  0.82889812790119 bayes_pls_golite062009
  • guanyl-nucleotide exchange factor activity
    		•  0.745321902095093 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.324566338715835 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.242570396032937 bayes_pls_golite062009
  • DNA binding
    		•  0.136435190086451 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle