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Protein Overview: rpt6

General Information:
Name(s) found: rpt6 / SPBC23G7.12c [Sanger Pombe]
Description(s) found:
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  • pir||S45176 26S proteinase regulatory subunit 8 homolog - fission yeast (Schizosaccharomyces pombe) [NCBI NR]
  • gi|4106689|emb|CAA22628.1| 19S proteasome regulatory subunit Rpt6 (predicted) [Schizosaccharomyces pombe] [NCBI NR]
  • gi|406051|gb|AAA61615.1| Let1 [NCBI NR]
  • gi|19112662|ref|NP_595870.1| 19S proteasome regulatory subunit Rpt6 [Schizosaccharomyces pombe 972h-] [NCBI NR]
  • gi|1170767|sp|P41836.1|PRS8_SCHPO RecName: Full=26S protease regulatory subunit 8 homolog; AltName: Full=Protein let1 [NCBI NR]
  • 19S proteasome regulatory subunit Rpt6 [Sanger Pombe]
  • 26S protease regulatory subunit 8 homolog OS=Schizosaccharomyces pombe GN=let1 PE=2 SV=1 [Swiss-Prot]
  • 19S PROTEASOME REGULATORY SUBUNIT: P41836; [pompepVF.fasta]
  • 26S protease regulatory subunit 8 homolog (Protein let1) [pompep4896]
  • |rpt6|let1|19S proteasome regulatory subunit [pompepnew.fasta]
  • |rpt6|let1|19S proteasome regulatory subunit|Schizosaccharomyces pombe|chr 2|||Manual [pombe041504.fasta]
  • 26s protease regulatory subunit 8 homolog [Schizosaccharomyces pombe]gi|4106689|emb|CAA22628.1| let1 [Schizosaccharomyces pombe]gi|1170767|sp|P41836|PRS8_SCHPO 26S protease regulatory subunit 8 homolog (Protein let1)gi|626074|pir||S45176 26S proteinase [nrdb_11152004_Chlamydomonas]
  • (P41836) 26S protease regulatory subunit 8 homolog (Protein let1) [pompep4896_normal_reversed]
  • |rpt6|let1|19S proteasome regulatory subunit Rpt6 |Schizosaccharomyces pombe|chr 2|||Manual [SGD_S-Pombe_na_10-23-2009_con_reversed.fasta]
  • SPBC23G7.12c [Schizosaccharomyces pombe] [nr-271106-contam.fasta]
  • Let1 [nr-271106-contam.fasta]
  • hypothetical protein SPBC23G7.12c [Schizosaccharomyces pombe 972h-] [nr-271106-contam.fasta]
  • 26S protease regulatory subunit 8 homolog OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=let1 PE=3 SV=1 [uniprot_sprot.fasta.20160308]
    • Organism: Schizosaccharomyces pombe
    Length: 403 amino acids

    Gene Ontology:
    Cellular Component: nuclear envelope [IDALink to PubMed article]
    nucleus [IDALink to PubMed article]
    proteasome regulatory particle, base subcomplex [ISSLink to PubMed article]
    cytosol [IDALink to PubMed article]
    Biological Process: regulation of cell cycle [RCALink to PubMed article]
    mitotic cell cycle [IC]
    ubiquitin-dependent protein catabolic process [ISSLink to PubMed article]
    Molecular Function: ATPase activity [ISSLink to PubMed article]
    ATP binding [ISSLink to PubMed article]
    endopeptidase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTEVLKTNVL QSNENIVQYY TQKIQDAELA ILQKTQNLRR LEAQRNGLNA RVRLLREEIQ  60
   61 LLQEPGSYVG EVIKTMGKNK VLVKVHPEGK YVVDISPDID IKEIKPNIRV ALRNDSYQLI 120
  121 KILPNKVDPL VSLMMVEKIP DSTYEMVGGL EKQIKEIKEV IELPVKHPEL FESLGIPQPK 180
  181 GILLYGPPGT GKTLLARAVA HHTDCKFIRV SGSELVQKYI GEGSRMVREL FVMAREHAPS 240
  241 IIFMDEIDSI GSSRSDSSGG SGDSEVQRTM LELLNQLDGF EATKNIKVIM ATNRIDILDP 300
  301 ALLRPGRIDR KIEFPPPSAE ARAEILRIHS RSMNLTRGID LKSIAEKMNG ASGAELKGVC 360
  361 TEAGMFALRE RRVHVTQEDF ELAVAKVLNK GDSGEMSLQK LFK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..403] PSI-BLAST 77.30103 VCP/p97


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle