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Protein Overview: pof6

General Information:
Name(s) found: pof6 / SPCC18.04 [Sanger Pombe]
Description(s) found:
Found 17 descriptions.
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  • F-box protein Pof6 [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 872 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed articleLink to PubMed article]
    cell tip [IDALink to PubMed article]
    ubiquitin ligase complex [ISSLink to PubMed article]
    cytoplasm [IDALink to PubMed article]
    barrier septum [IDALink to PubMed article]
    cytosol [IDALink to PubMed article]
    [NOT]nucleolus [IDALink to PubMed article]
    Biological Process: vesicle docking [IEA]
    cytokinesis [IMPLink to PubMed article]
    cytokinetic cell separation [IMPLink to PubMed article]
    endocytosis [ISSLink to PubMed article]
    exocytosis [IEA]
    Molecular Function: protein binding [IPILink to PubMed articleLink to PubMed article]
    protein binding, bridging [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKPSEAREHA IRKIKEYLER RHKQQFKALF GCLTINIYLK IFTLISTPDL CNCRLVCRKF  60
   61 QQLCDYNSIY VKKLLLMNAW DVTLSRKLYY ESQDGMSQAN MSSNTSKGFH LQSSDKKYAD 120
  121 SDRPKLSSSS LLSLPDQKIP FPVDYSTVQG KQVVLTVLDC VSQRVEFARL DYIKVWRALA 180
  181 PIYRNLAYAS NTIDPIAFSA FRTPEEQSKV LKYLIRFGNS YPYGTYRQAM QNAILDMASL 240
  241 FEQACLDEFE LGLHSRNLDL LRKFSHVLHD FSGPNAYVSM YLAKQTDFVR SFFHFDPYSL 300
  301 FISNNLEEIH INWNILESVV NDTIKLLESE SKFSEATLPE PELVQVPYAK DILGNSLKDY 360
  361 VISICEHIGE EETELFLVFI SGFYGLCKKF FSIPNGPALV DTIFQPQIDI FISQELHYFK 420
  421 TVGWSLVDQW DQKLEEKEDA TECFFYKNVS QNTAKNNFLE TFKNVMLLPV SLFTIPSENN 480
  481 SASNLAEKAI EQKEEEDPEL SKLDAARFVP ANIYVSKDRL KHLPTTELAA QAAVLDSKLE 540
  541 GISTMFSLEL ALKIVHLCKV SLARAKVFMG TSVPQDDDIK GLSKDLFVQL LRELGQGHLK 600
  601 HGFDRAIEHL SSFDPRRDFS SNTVEPVVKF LELINVGDMI QQMMDSFFNE EMSPICVKDD 660
  661 MFDPAIAEKK KFEQLLDERA AFGLHKGINV LIEHADFLLE TKTPMNLFSD QTIGSITNTI 720
  721 EPTAAAKNVV QFLGFHMRIL VGRADHEILD VFYKEVGMRL FDSLTRYIKS HKFSVDGGLK 780
  781 LLSDCNLYYE FIHSLHQSSL LPYFKTLKEI AHLFIIDGKN AEEIGKLATD TSRFSSAFHT 840
  841 EEVYEILHSR IDWLNIKYEV DKVIHGLACC IM

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..227] PSI-BLAST 24.39794 No description for 2ovpB was found.
    2 View Details [228..338] deduced N/A No confident structure predictions are available.
    3 View Details [339..489] deduced N/A No confident structure predictions are available.
    4 View Details [490..536] deduced N/A No confident structure predictions are available.
    5 View Details [537..675] deduced N/A Confident ab initio structure predictions are available.
    6 View Details [676..872] MSA 3.054959 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.85

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle